Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme83134g00001 ATGCAAACAAGATCAATATTATCTTCGCCTAACTGTATTGTATCACTCCAAACAATAGGAAACAAAGGTGCAGGAAGAACACCATTTGATTGGGATTCAAGAGTGAAGATTGCACTTGGAACAGCTAAAGGAATTGCTTTCATTCACACTGAAGGAGGTTCAAAATTTACACATGGAAACATCAAATCAACCAATGTACTAATAACAGAAGAATTCGATAGCTGCATTTCTGATGTTGGATTACCTCCTTTGATGAATGCACCAGCAACAATGTCTAGAACAAACGGATATAGAGCTCCAGAAGTAACCGATTCCAAAAAGATCACACAAAAATCCGATGTATACAGCTTCGGCGTACTGCTACTCGAAATGCTAACAGGCAAGATTCCACTGAGATATCCTGGTTATGAAGACGTTGTCGATCTTCCAAGATGGGTTAGGTCTGTTGTGAGAGAGGAATGGACAGCTGAAGTATTTGATGAGGAGCTTCTTCGAGGACAATATGTCGAAGAGGAAATGGTGCAGATGCTTCAGATTGCACTTGCATGTGTGGCTAAGA 559 0.4043 MQTRSILSSPNCIVSLQTIGNKGAGRTPFDWDSRVKIALGTAKGIAFIHTEGGSKFTHGNIKSTNVLITEEFDSCISDVGLPPLMNAPATMSRTNGYRAPEVTDSKKITQKSDVYSFGVLLLEMLTGKIPLRYPGYEDVVDLPRWVRSVVREEWTAEVFDEELLRGQYVEEEMVQMLQIALACVAK 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme83134g00001 186 SUPERFAMILY Protein kinase-like (PK-like) 21 184 IPR011009 -
Trme83134g00001 186 ProSiteProfiles Protein kinase domain profile. 1 186 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme83134g00001 186 Gene3D Transferase(Phosphotransferase) domain 1 15 186 - -
Trme83134g00001 186 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 14 186 - -
Trme83134g00001 186 Pfam Protein kinase domain 30 132 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme83134g00001 186 PANTHER OS05G0588300 PROTEIN 25 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme83134g00001 Trme-Chr83134 1 559 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme83134g00001 20 186 Receptor kinase-like Gene Family AT5G58300 67.066 2.98e-78 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Trme83134g00001 Pkinase 1.2e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme83134g00001 - - aprc:113868460 323.939