Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme83078g00001 AAATCAACTTTAACCGATTCTCTTGTGGCTGCTGCTGGCATTATAGCACAAGAGGTTGCAGGAGATGTTAGGATGACAGATACCCGTCAAGACGAAGCTGAGCGTGGTATAACAATCAAGTCAACCGGTATCTCTCTTTACTATGAGATGAGTGATGGTGATTTGAAGAATTTCAAAGTGTTGAGACAAGCACTTGGAGAAAGGATTAAACCTGTTTTAACTGTCAACAAAATGGATAGGTGTTTTCTCGAGCTTCAACTTGATCCAGAAGAGGCATACTTGACGATACAGAGAGTCATTGAGAGTGCCAATGCCATCATGGCAACCTATGAAGACGCTTTACTTGGTGATGTTCAGGTTTATCCTGAAAAGGGAACGGTTGCATTTTCTGCTGGTTTGCATGGATGGTCTTTTACTCTCACCAACTTTGCTAAGATGTATGCTTCAAAGTTTGGAATTGATGAGGAGAAGATGATGAACAGGCTTTGGGG 491 0.4196 KSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMSDGDLKNFKVLRQALGERIKPVLTVNKMDRCFLELQLDPEEAYLTIQRVIESANAIMATYEDALLGDVQVYPEKGTVAFSAGLHGWSFTLTNFAKMYASKFGIDEEKMMNRLWG 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme83078g00001 164 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 1 49 - -
Trme83078g00001 164 Gene3D - 1 57 IPR027417 -
Trme83078g00001 164 Pfam Elongation factor Tu GTP binding domain 1 48 IPR000795 GO:0003924|GO:0005525
Trme83078g00001 164 Pfam Elongation factor Tu GTP binding domain 59 139 IPR000795 GO:0003924|GO:0005525
Trme83078g00001 164 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 164 IPR027417 -
Trme83078g00001 164 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 27 42 IPR031157 -
Trme83078g00001 164 Gene3D - 58 154 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme83078g00001 Trme-Chr83078 1 644 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme83078g00001 1 164 Eukaryotic Initiation Factors Gene Family AT1G56070 66.977 2.14e-88 273