Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme83060g00001 GCCATTCAGATGAATGTACAAGAGGATATTCGGAAACAGATTGTTCAGGAACTGAAAATAAACCAAGCATCACAGTGTCCACATGTTGTAGTTTGCTACCACTCATTCTATAACAATGGAGTTATATCTCTTGTATTAGAATACATGGACCGTGGTTCTCTCGTAGATGTAATCAGACAAGTTAATACAATTCTGGAACCATATCTTGCGGTGGTTTGTAAGCAGGTGTTACAGGGTCTTGTTTACTTGCACAATGAAAGACATGTCATACATAGGGACATCAAACCATCCAATCTTTTAGTAAATCACAAAGGGGAAGTGAAGATTACTGATTTTGGCGTTAGTGCTATGCTGGCAAGCACAATGGGCCAAAGAGATACATTTGTTGGAACTTATAATTACATGTCGAAAGAGAAGAATGCATGA 426 0.3826 AIQMNVQEDIRKQIVQELKINQASQCPHVVVCYHSFYNNGVISLVLEYMDRGSLVDVIRQVNTILEPYLAVVCKQVLQGLVYLHNERHVIHRDIKPSNLLVNHKGEVKITDFGVSAMLASTMGQRDTFVGTYNYMSKEKNA 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme83060g00001 141 Gene3D Phosphorylase Kinase; domain 1 1 50 - -
Trme83060g00001 141 ProSitePatterns Serine/Threonine protein kinases active-site signature. 89 101 IPR008271 GO:0004672|GO:0006468
Trme83060g00001 141 SMART serkin_6 1 141 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme83060g00001 141 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 2 138 - -
Trme83060g00001 141 ProSiteProfiles Protein kinase domain profile. 1 141 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme83060g00001 141 Pfam Protein kinase domain 8 138 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme83060g00001 141 Gene3D Transferase(Phosphotransferase) domain 1 52 139 - -
Trme83060g00001 141 SUPERFAMILY Protein kinase-like (PK-like) 6 138 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme83060g00001 Trme-Chr83060 73 702 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme83060g00001 2 139 MAP Kinase Kinase Gene Family AT5G56580 89.928 2.14e-89 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Trme83060g00001 Pkinase 2.1e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme83060g00001 K04368 - gmx:100786284 266.544