Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme82860g00001 AAGGAAAACAGTTTTCCTGACCCTCTTTCCATGAATGCTTGGCAGGCTCTTTATCGAAGCTCTGTCGATGGAAAACATTATGCAATTAAGGCCTTTCATAAGTCTCATTTACTGAAGCTTCGAGTTGCACCCTCAGAAACGGCCATGACTGATGTTCTTCGTGAGGTTTTCATTATGAAAATGCTTCAACATCCTAATATAGTGAATCTCATTGAAGTGATTGATGATCCAGAATCGGATAACTTCTACATGGGTACTGTTGGCTAG 267 0.4045 KENSFPDPLSMNAWQALYRSSVDGKHYAIKAFHKSHLLKLRVAPSETAMTDVLREVFIMKMLQHPNIVNLIEVIDDPESDNFYMGTVG 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme82860g00001 88 PANTHER MAP/MICROTUBULE AFFINITY-REGULATING KINASE 17 83 - -
Trme82860g00001 88 Gene3D Phosphorylase Kinase; domain 1 15 86 - -
Trme82860g00001 88 SUPERFAMILY Protein kinase-like (PK-like) 19 84 IPR011009 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme82860g00001 19 77 CBL-interacting serine-threonine protein kinases AT5G35410 40.678 1.44e-06 42.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-LKB Trme82860g00001 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme82860g00001 K00908 - gmx:100776013 130.568