Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme82839g00001 TTTGCTGGTGCAGCCCAGTCTCTTGGTGCTGGGGCAATTCTCGTCAATCCGTGGAACGTTACAGATGTTGCTACTGCAATTGGAAGAGCTCTGAATATGCTACCTGCGGAAAGAGAAAAGAGACATAAGCATAATTTTCTTCATGTGAAATCCCACACTGCACAGGAATGGGCAGGAACGTTTGTAAGATAG 192 0.4583 FAGAAQSLGAGAILVNPWNVTDVATAIGRALNMLPAEREKRHKHNFLHVKSHTAQEWAGTFVR 63
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme82839g00001 63 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 1 62 - -
Trme82839g00001 63 Pfam Glycosyltransferase family 20 1 62 IPR001830 GO:0003824|GO:0005992
Trme82839g00001 63 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 62 IPR001830 GO:0003824|GO:0005992
Trme82839g00001 63 Gene3D Glycogen Phosphorylase B; 1 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme82839g00001 Trme-Chr82839 99 390 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme82839g00001 1 62 Trehalose Biosynthesis Gene Families AT1G78580 80.645 3.54e-31 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme82839g00001 K16055 - gmx:100797320 112.464