Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme828393g00001 GAAGGAAATGGACCAGCTCCTTACACCTTTGTGCCATTTGGTGGAGGACCAAGGATGTGCCCTGGAAAAGAGTATGCAAGATTAGAAATACTAGTTTTCATGCACAATTTAGTGAAAAGGTTCAAGTGGGAAAAGTTGATTCCAGATGAGAAGACTATTGTTGATCCCTTCCCCATCCCAGCAAAGGGCCTCCCAATTCGCCTTTATCCACACAAAGCTTGA 222 0.4414 EGNGPAPYTFVPFGGGPRMCPGKEYARLEILVFMHNLVKRFKWEKLIPDEKTIVDPFPIPAKGLPIRLYPHKA 73
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme828393g00001 73 Gene3D Cytochrome P450 1 70 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme828393g00001 73 SUPERFAMILY Cytochrome P450 6 70 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme828393g00001 73 Pfam Cytochrome P450 6 46 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme828393g00001 73 PRINTS E-class P450 group I signature 10 20 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme828393g00001 73 PRINTS E-class P450 group I signature 20 43 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme828393g00001 73 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 13 22 IPR017972 GO:0005506|GO:0016705
Trme828393g00001 73 PANTHER CYTOCHROME P450 26 6 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme828393g00001 Trme-Chr828393 2 223 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme828393g00001 4 72 Cytochrome P450 AT3G19270 46.377 1.07e-16 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme828393g00001 K20667 - qsa:O6P43_003868 155.221