Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme82826g00001 ATGGGTAGCAAAAGCAAAGATAACCATGACAGAGAACTTAAGAAGGTTTTGACTCACAAAGGTCGATATGTGCAATACACTTTGTATGGAAATTTGTTTGAAGTGTCCTCAAAATATATTCCTCCCCTTCGCCCTATCGGTAGAGGTGCTTATGGAATCGTCTGTGCTGCTGTTAATTCTGATACACATGAGGAAGTTGCTATTAAGAAAATTGGCAATACATTTGACAACATTATTGATGCTAAAAGAACTTTGAGGGAAATTAAGCTCCTTCGTCACATGGATCATGAAAATGTATTCTAA 303 0.3696 MGSKSKDNHDRELKKVLTHKGRYVQYTLYGNLFEVSSKYIPPLRPIGRGAYGIVCAAVNSDTHEEVAIKKIGNTFDNIIDAKRTLREIKLLRHMDHENVF 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme82826g00001 100 Pfam Protein kinase domain 44 99 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme82826g00001 100 FunFam Mitogen-activated protein kinase 25 100 - -
Trme82826g00001 100 ProSitePatterns Protein kinases ATP-binding region signature. 46 70 IPR017441 GO:0005524
Trme82826g00001 100 ProSiteProfiles Protein kinase domain profile. 40 100 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme82826g00001 100 SUPERFAMILY Protein kinase-like (PK-like) 22 99 IPR011009 -
Trme82826g00001 100 Gene3D Phosphorylase Kinase; domain 1 16 100 - -
Trme82826g00001 100 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 38 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme82826g00001 Trme-Chr82826 244 751 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme82826g00001 14 99 MAP Kinase Gene Family AT4G01370 84.884 4.70e-48 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Trme82826g00001 Pkinase 1.7e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme82826g00001 - - cam:101500105 179.874