Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme82795g00001 ATGATTAGAGAGGCTGAAAATTACCGCATTGAAGATGAGAAATTTCTGAGGAAGGCCAATGTGATGAATGCATTAGATTTATGCGTTTACAAGATGAAGAATGCTCTAAAGAATAAGGAGGTTAAAGTAAAGCTCTCATCTAAAGAAAAAGACCGGATTGATCGTGAAATTACTAAGGCCACAGATTTGCTTGACAGTGCCCAACAAAGGGAAATAGATGTTCTTGAAAATCATCTGAAGGAGCTTGAGAGTAGTATATTCCAACAAATTATTGGTAGATATGTCTAG 288 0.3611 MIREAENYRIEDEKFLRKANVMNALDLCVYKMKNALKNKEVKVKLSSKEKDRIDREITKATDLLDSAQQREIDVLENHLKELESSIFQQIIGRYV 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme82795g00001 95 Gene3D - 1 95 IPR029048 -
Trme82795g00001 95 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 22 85 IPR029048 -
Trme82795g00001 95 Coils Coil 50 85 - -
Trme82795g00001 95 Pfam Hsp70 protein 1 88 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme82795g00001 Trme-Chr82795 155 442 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme82795g00001 1 93 Calmodulin-binding Proteins AT3G12580 38.710 9.71e-14 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme82795g00001 - K03283 mtr:120576106 111.309