Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme82664g00001 GCTTTAATGGGGACTTTTGATGGTATCATTGACACTGTTTCAGCACAACATCCACTAGTGCCTTTGATTGCTCTAGTGAAGAATCATGGTAAATTTGTTATGGTTGGAGCACCAGAGAAGCCTTTGGAGGTTCCAGCATTTTCTATTATTGCAGGGAGAAAAACAATTAGTGGGAGTATGATTGGAGGAATAAAGGAGACACAAGAAATGATTGATTTTGCTGCCAAACATGGTGTGAAACCTGATATTGAGATTATTCCTGTAGATTATGTGAATACTGCAATGGAGCGTTTACTCAAATCTGATGTCAAATATCGATTTGTTATTGACATTGGAAACACATTGAAGGCAAGTT 355 0.3775 ALMGTFDGIIDTVSAQHPLVPLIALVKNHGKFVMVGAPEKPLEVPAFSIIAGRKTISGSMIGGIKETQEMIDFAAKHGVKPDIEIIPVDYVNTAMERLLKSDVKYRFVIDIGNTLKAS 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme82664g00001 118 PANTHER ALDEHYDE REDUCTASE 1 114 IPR047109 GO:0016616
Trme82664g00001 118 FunFam Putative cinnamyl alcohol dehydrogenase 6 1 81 - -
Trme82664g00001 118 FunFam Putative cinnamyl alcohol dehydrogenase 6 82 111 - -
Trme82664g00001 118 Pfam Zinc-binding dehydrogenase 5 75 IPR013149 -
Trme82664g00001 118 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 4 80 IPR036291 -
Trme82664g00001 118 Gene3D - 1 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme82664g00001 Trme-Chr82664 308 761 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme82664g00001 3 116 Monolignol Biosynthesis Gene Families AT4G37990 70.175 1.37e-47 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme82664g00001 K23232 - tcc:18611430 197.978