Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme82581g00001 CGGTTTTTCAAACGTGCTCAACTTGAGGCCTCGTCCTTCCTTAAGGATGACTGCTTGAAGATAAACTGCACTGTTGGTGTTGTTGTGTCTTCCATAGATTGTTCCAAACTGACCACAATACATGTGCCTGAATCTGATATTGGATCGCATTTTGGCATGCTGTTAGAGAATGAGGAAGGATCTGATGTTACTTTCTCTGTTGGTGGAGAAAGGTTTCATGCACACAAGCTTGTTATGGCAGCTCGGTCACCTGCATTTGAAGCCGAGTTTTTCAATCAGATGGAGGAAGATGACTGTGATATAGTTGTTACAGACATGGAACCTAAGGTTTTCAAGGTAGCTCTCTTCCTCTAA 354 0.4294 RFFKRAQLEASSFLKDDCLKINCTVGVVVSSIDCSKLTTIHVPESDIGSHFGMLLENEEGSDVTFSVGGERFHAHKLVMAARSPAFEAEFFNQMEEDDCDIVVTDMEPKVFKVALFL 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme82581g00001 117 Pfam BTB/POZ domain 53 112 IPR000210 GO:0005515
Trme82581g00001 117 Gene3D Potassium Channel Kv1.1; Chain A 27 116 IPR011333 -
Trme82581g00001 117 SUPERFAMILY POZ domain 39 115 IPR011333 -
Trme82581g00001 117 ProSiteProfiles BTB domain profile. 61 117 IPR000210 GO:0005515
Trme82581g00001 117 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1 1 115 IPR045005 GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme82581g00001 Trme-Chr82581 58 411 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Trme82581g00001 BTB 5.3e-15 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme82581g00001 K10523 - gmx:100809683 209.534