Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Trme825747g00001 | ACTGAGAAGGATATTACGCCTATGGGTGGATTCCCTCATTATGGTATTGTGAAGCATGATTATCTTATGATCAAAGGATGCTGTGTTGGACCAAAGAAGCGGGTTGTCACTCTTCGTCAGTCACTACTCAAGCAGACATCTCGATTGGCTCTTGAA | 156 | 0.4359 | TEKDITPMGGFPHYGIVKHDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALE | 52 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Trme825747g00001 | 52 | Gene3D | Translation factors | 1 | 52 | - | - | |
| Trme825747g00001 | 52 | Pfam | Ribosomal protein L3 | 1 | 52 | IPR000597 | GO:0003735|GO:0005840|GO:0006412 | |
| Trme825747g00001 | 52 | PANTHER | 60S RIBOSOMAL PROTEIN L3-RELATED | 1 | 52 | IPR045077 | GO:0003735|GO:0005840|GO:0006412 | |
| Trme825747g00001 | 52 | SUPERFAMILY | Translation proteins | 1 | 47 | IPR009000 | - |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Trme825747g00001 | 1 | 52 | Cytoplasmic Ribosomal Protein Gene Family | AT1G61580 | 94.231 | 3.01e-30 | 106 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Trme825747g00001 | K02925 | - | cit:102619970 | 107.457 |