Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme824460g00001 TTAGCTGCCTTTGATGATGCCATAAGAGACGGTGTTCACATTATATCTTTATCTCTTGGTCCTGAAGCTCCTCAAGGTGACTATTTCAATGATGCCATATCTGTGGGATCATTCCATGCTGCTAGACATGGAGTGCTTGTAGTAGCATCTGCTGGAAATGAAGGAACTGTTGGCTCTGCAACAAACCTTGCACCATGGATTATCACTGTTGCTGCTAGCTCAACAGATAGGGATTTC 237 0.4388 LAAFDDAIRDGVHIISLSLGPEAPQGDYFNDAISVGSFHAARHGVLVVASAGNEGTVGSATNLAPWIITVAASSTDRDF 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme824460g00001 79 Gene3D Peptidase S8/S53 domain 1 75 IPR036852 GO:0004252|GO:0006508
Trme824460g00001 79 SUPERFAMILY Subtilisin-like 1 78 IPR036852 GO:0004252|GO:0006508
Trme824460g00001 79 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 79 IPR045051 -
Trme824460g00001 79 ProSiteProfiles Serine proteases, subtilase domain profile. 1 79 - -
Trme824460g00001 79 Pfam Subtilase family 2 75 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme824460g00001 Trme-Chr824460 1 237 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme824460g00001 1 79 Subtilisin-like Serine Gene Family AT1G20160 58.025 5.77e-23 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme824460g00001 - - aip:107642485 153.68