Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme82355g00001 ATGCATAATTCATCATCAAGAAGAAGTTTTGGTAGGAATTCAACAAGAGAAGTGACTTTTAGTCACTCAGAGTCAAAACCTTCTGTGAGGTATGGGTCAAAGGGTGCTGATTCTGAAGCTTTTAGTATGTCTCAGAAAGAAATTAGTGATGAAGATGCTAGGTTGATTTATGTTGATGATCCTGTTAAGACAAATGAGAGATTTGAATTTGCAGGGAATTCGGTTCGAACCGGAAAGTACTCTTTCATAACTTTTCTTCCTAGGAATTTGTTTGAACAGTTTCATAGAGTTGCTTATATTTATTTCCTTATAATTGCTATTCTTAATCAGTTACCTCAATTAGCTGTTTTTGGAAGAGGTGTTTCGATTTTACCATTGGCTTTTGTTCTTCTTGTTACTGCTGTGAAAGATGCATATGAGGATTGGAGGAGACATAGGTCTGATAAAGTTGAGAACAATAG 461 0.3536 MHNSSSRRSFGRNSTREVTFSHSESKPSVRYGSKGADSEAFSMSQKEISDEDARLIYVDDPVKTNERFEFAGNSVRTGKYSFITFLPRNLFEQFHRVAYIYFLIIAILNQLPQLAVFGRGVSILPLAFVLLVTAVKDAYEDWRRHRSDKVENN 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme82355g00001 153 SUPERFAMILY Calcium ATPase, transmembrane domain M 70 149 IPR023298 -
Trme82355g00001 153 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 42 153 - -
Trme82355g00001 153 MobiDBLite consensus disorder prediction 1 28 - -
Trme82355g00001 153 Pfam Phospholipid-translocating ATPase N-terminal 56 122 IPR032631 -
Trme82355g00001 153 MobiDBLite consensus disorder prediction 1 46 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme82355g00001 5 153 Primary Pumps ATPases AT5G04930 74.497 5.13e-72 232
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme82355g00001 K14802 - jre:109009997 241.121