Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme82330g00001 GCAACACTTGGTCCTATTGATGAAACAACAGAATCAAGATCAGCTAGAGATGATGATGGACATGGAAGTCATACCTTAACAACAGCAGGTGGTTCTGAAGTAGCAGAAGCTAGCTTATTCGGTTTAGCTTCTGGTACTGCAAGAGGCATGGCTACACAAGCGCGTGTCGCGGCATACAAAGTGTGTTGGCTTGGTGGTTGTTTCACTTCAGATATAGTTGCAGGAATCGATAAAGCTATTGAAGACGGTGTTAACATCTTATCGATGTCAATTGGTGGTAGCCAAACAGAATACTATAGAGACATCCTTGCAATTGGTTCTTTCACAGCAATGTCTCATGGAATTCTAGTTTCTGCTTCAGCGGGAAACGGTGGACCAAGTGCTGAAAGCTTGTCGAACGTAGCACCGTGGATAACAACAGTCGGAGCAGGAACAATTGATCGCGATTTCCCATCTTATATATCACTTGGAAATGGAAAAAATTACACTGGTGCATCACTTTACAATGGAAAACCTTTACCGGATTCATTGCTACCAGTTGTTTATGCAGGTAATGCTACAAATTCCTCAGTTGGGTATCTTTGTATACCNGATTCATTAATAAGTTCAAAAGTTTCCGGCAAAATTGTGATATGTGAAAGAGGTGGAAACTCAAGAGTTGAAAAGGGTCTAGTTGTAAAAACTGCTGGTGGAGTTGGAATGATTTTGGTTAACAATGAAGGGTATGGTGAAGAGTTAATTGCTGATCCTCATCTTATTCCA 762 0.4108 ATLGPIDETTESRSARDDDGHGSHTLTTAGGSEVAEASLFGLASGTARGMATQARVAAYKVCWLGGCFTSDIVAGIDKAIEDGVNILSMSIGGSQTEYYRDILAIGSFTAMSHGILVSASAGNGGPSAESLSNVAPWITTVGAGTIDRDFPSYISLGNGKNYTGASLYNGKPLPDSLLPVVYAGNATNSSVGYLCIPDSLISSKVSGKIVICERGGNSRVEKGLVVKTAGGVGMILVNNEGYGEELIADPHLIP 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme82330g00001 254 Gene3D Peptidase S8/S53 domain 3 198 IPR036852 GO:0004252|GO:0006508
Trme82330g00001 254 SUPERFAMILY Subtilisin-like 11 185 IPR036852 GO:0004252|GO:0006508
Trme82330g00001 254 SUPERFAMILY PA domain 175 240 IPR046450 -
Trme82330g00001 254 Pfam PA domain 179 250 IPR003137 -
Trme82330g00001 254 ProSiteProfiles Serine proteases, subtilase domain profile. 1 254 - -
Trme82330g00001 254 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 11 246 IPR045051 -
Trme82330g00001 254 MobiDBLite consensus disorder prediction 1 28 - -
Trme82330g00001 254 FunFam subtilisin-like protease SBT1.5 147 254 - -
Trme82330g00001 254 CDD PA_subtilisin_like 153 254 - -
Trme82330g00001 254 Pfam Subtilase family 6 158 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme82330g00001 Trme-Chr82330 1 762 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme82330g00001 1 254 Subtilisin-like Serine Gene Family AT5G67360 68.898 2.30e-121 361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme82330g00001 - - gmx:100799654 437.958