Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme82296g00001 CAGGGCAAAGGATCCTTTGCTTATGCTTGGGCACTTGATGAAAGTTCTGAAGAAAGGGAAAGGGGAATAACCATGACAGTAGCTGTGGCATATTTTGACACTAAGAAATATCACGTTGTTGTGCTTGACTCTCCTGGGCATAAAGATTTTATCCCAAACATGATTTCTGGAGCTACACAAGCTGATGCTGCAATTCTTGTTATAGATGCCTCACTTGGTGCATTCGAAGCTGGTATGGATGGTGGCAAAGGACAAACAAGGGAACATGCACAACTTATACGAAGTTTTGGTGTAGACCATGTTATAGTTGCAGTAAATAAGATGGATGCTGTAGCATTTTCCAAAGACCGTTTTGATTTTATAAGACATCAGCTGGGAATTTTTCTCCGTTCATGTGGGTTCAAAGATTCTTCTCTCTCATGGATTCCCTTGAGTGCCATGGAAAATCAAAATTTGGTGGCATCCCCTTCTGATGCTCGTTTCAAAAACTGGTATGTCACTGATTACTCTAKATGTGATCTTAACTTCCCTTGGTGGGCAATGAATAATGTTATGGAATTGTGA 564 0.406 QGKGSFAYAWALDESSEERERGITMTVAVAYFDTKKYHVVVLDSPGHKDFIPNMISGATQADAAILVIDASLGAFEAGMDGGKGQTREHAQLIRSFGVDHVIVAVNKMDAVAFSKDRFDFIRHQLGIFLRSCGFKDSSLSWIPLSAMENQNLVASPSDARFKNWYVTDYSXCDLNFPWWAMNNVMEL 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme82296g00001 187 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 152 IPR027417 -
Trme82296g00001 187 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 1 187 IPR000795 GO:0003924|GO:0005525
Trme82296g00001 187 Pfam Elongation factor Tu GTP binding domain 11 152 IPR000795 GO:0003924|GO:0005525
Trme82296g00001 187 PRINTS GTP-binding elongation factor signature 20 28 IPR000795 GO:0003924|GO:0005525
Trme82296g00001 187 PRINTS GTP-binding elongation factor signature 101 110 IPR000795 GO:0003924|GO:0005525
Trme82296g00001 187 PRINTS GTP-binding elongation factor signature 56 67 IPR000795 GO:0003924|GO:0005525
Trme82296g00001 187 PRINTS GTP-binding elongation factor signature 40 50 IPR000795 GO:0003924|GO:0005525
Trme82296g00001 187 Gene3D - 1 187 IPR027417 -
Trme82296g00001 187 PANTHER TRANSLATION FACTOR 1 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme82296g00001 Trme-Chr82296 3 566 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme82296g00001 1 165 Eukaryotic Initiation Factors Gene Family AT5G10630 77.576 4.49e-93 283