Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme82295g00001 GTAAGTGAAGAGTTAACACGACATGGAATGAAATCCTTAAAAGAAAACCTTTTTTCTACACTGTTAGCAGAAGATGTGAAAATTGATACACCAAATAGGTTGTCCAGTGATATTGAGAGAAGGATTGGTCGCATGAAGGTTCTTATTGTTCTTGATGATGTCAAGGATACAGATCAGCTAGAGATGTTATTTGGAACTCTTGATTGGTTTCGATCCGATAGTAGAATAATTGTAACAACAAGAGATAAGCAAGTACTTATTGCTAATGAAGCTGATGATATATTCGAAGTTGGGGTATTAGATTCTGGTGAAGCACTTGAGCTTTTCAATTTGAATGCCTTTAAACAAAGTCATCTTGAAATGGATTATTTTGATATATCAAAGAGGGTGGTCAATTATGCCAAAGGAATTCCATTAGTTCTCAAAGTTTTGGCTCATCTGCTTTGTGGAAAAGATAAACATATATTGCTTGTTTCTTCAATGGGTTGA 489 0.3456 VSEELTRHGMKSLKENLFSTLLAEDVKIDTPNRLSSDIERRIGRMKVLIVLDDVKDTDQLEMLFGTLDWFRSDSRIIVTTRDKQVLIANEADDIFEVGVLDSGEALELFNLNAFKQSHLEMDYFDISKRVVNYAKGIPLVLKVLAHLLCGKDKHILLVSSMG 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme82295g00001 162 PRINTS Disease resistance protein signature 41 55 - -
Trme82295g00001 162 PRINTS Disease resistance protein signature 134 148 - -
Trme82295g00001 162 Pfam NB-ARC domain 12 151 IPR002182 GO:0043531
Trme82295g00001 162 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 153 IPR027417 -
Trme82295g00001 162 Gene3D - 1 94 IPR027417 -
Trme82295g00001 162 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 6 153 IPR044974 GO:0006952
Trme82295g00001 162 Gene3D - 99 156 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme82295g00001 Trme-Chr82295 115 715 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme82295g00001 41 153 WRKY Transcription Factor Family AT5G45050 38.053 9.55e-19 80.5