Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme82028g00001 TGTCATACTCCTCCGCACAAGGCTGGCAGGGTTCCTTTCTATGTAACATGTTCTAATAGGTTAGCATGTAGTGAAGTGCGTGAATTTGATTTCCGAGCTAATTATACTCAAGAAGTCAACACTGGAGGCGAGAGCAGTAGCAGCAACACTTTCGATACTTTTAATAGACGGTTTGGTGAACTGTTGTCTCTGGAGCATGACTTCCCTCAGAGTTTAGATTCAATTAGTGTGAATGAGAATTCTCAANNNNNNNNNNTNNNNNNNNNNTTGCTTAGGAGGGATGATAATGAATGGGACAAACTACTGAAATTTACTCTAGAGAAAGAATTTTCTCTGGAGCTTGTACAGGAGCAGCTGCTTGAAAATCTTCTAAAAGATAAGTTGTATGCATGGCTCCTTCAGAAAACAACTGAAGATGGGAAAGGTCCAAATGTATTAGATGAAGGTGGACAAGGTGTACTTCATTTAGCAGCTGCTCTTGGCTATGATTGGGCCTTAGAACCAACAATAGTTGCTGGTGTGAATGTGAACTTTCGCGATGTAAATGGATGGACTGCTCTTCATTGGGCAGCGTTTTGTGGCAGGTGA 588 0.4031 CHTPPHKAGRVPFYVTCSNRLACSEVREFDFRANYTQEVNTGGESSSSNTFDTFNRRFGELLSLEHDFPQSLDSISVNENSQXXXXXXXLLRRDDNEWDKLLKFTLEKEFSLELVQEQLLENLLKDKLYAWLLQKTTEDGKGPNVLDEGGQGVLHLAAALGYDWALEPTIVAGVNVNFRDVNGWTALHWAAFCGR 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme82028g00001 195 Gene3D - 96 195 IPR036770 -
Trme82028g00001 195 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 1 195 - -
Trme82028g00001 195 SUPERFAMILY Ankyrin repeat 133 194 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme82028g00001 Trme-Chr82028 175 762 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme82028g00001 1 195 CAMTA Transcription Factor Family AT2G22300 52.792 1.10e-60 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme82028g00001 K21596 - gmx:100798875 311.227