Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme8200g00001 ATGGCTGAACAAATTCTACACGGTGTTGCTAGAAGCCTCATCAACAGCTTGGCTTCTGCTGCCTTATGTGAATATGGACGGATTAATGGTGTAATGGATGAGTTGGAGAGGCTCAAGAACACAGTTGAATCTATTAGATCTGTGCTGCTTGATGCTGACGACAAACAAGACCAAAGTCATGCTGTACAAAACTGGGTAAAAAGGCTCAACGATGTTCTTATTCCTGCAGACGATTTGCTAGATGAATTTGTTATTCAAGACATGATACACAAAAGGGATGAACCTCATCGAAACAAAGTAAAAAAGGTACTTCATTTCATCTCTCCAAAAAAATTTGCTTTGCGCCGTAACATGGCTCATGAGCTTGAAAAAATACGAAAAAATTTTGAGGATGTGGTGAAAGATATGTCTGGGTTGAATCTAAATCCAAATGTTGTGGTGGTTGAGAAAACTATCAGCGAATGGAGGGAAACTAGTTCTTATGTGCTAGAATCAGAAATTGTTGGAAGAGAAGATGATAAAAAGAAGATTGTAAACTTGTTGAGACAGCCTCATCAAATTCAGAATGTCTCTTTGGTTGTGATTGTTGGGATGGGTGGTTTGGGAAAGACAGCTCTTGCTCAGTTGATATATAGTGACAAGAAAGTGAAAGATTTGTTTGAAAAGAGGATGTGGGTATGCGTCTCTGAAAACTTTGATGTTAAGACAATTCTGAAGAACATGTTGTGGTCACTGACCGATCACAAATCTGATGATGCATCATCGTTGGAATACTTGCAAAATAAGCTTCATGACAATTTAACTGGTAAGCGATACTTGTTAGTCCTAGATGACGTTTGGAATGATAGTTCTGTAAAGTGGGATAATTTGAGGACTTACTTGATGTGTGGTGCTCAAGGCAGTAAGGTTTTAGTGACAACTCGTCTTAAAACTGTGGCACAGACAATGGGTGTAAGTGACCCCTATGTTTTGAAAGGTCTGACTCAAGAAAAATCATGGAATTTGTTAAAGAAGATTGCATTTATGGATGATACCATAAGAGTGGATCAAACTATTGAATCAATTGGTAAGAAGATAGCAGAAAAGAGCAAAGGAGTTCCATTAGCAATTAAATCATTGGGAGGCATATTACAGAGTAAAAGTGAAGTAAATGAATGGATTGATGTCTTACGAGGTGATTTTTGGAAATTGTGTGAGGATAAAGATAACATCTTGCCG 1218 0.3785 MAEQILHGVARSLINSLASAALCEYGRINGVMDELERLKNTVESIRSVLLDADDKQDQSHAVQNWVKRLNDVLIPADDLLDEFVIQDMIHKRDEPHRNKVKKVLHFISPKKFALRRNMAHELEKIRKNFEDVVKDMSGLNLNPNVVVVEKTISEWRETSSYVLESEIVGREDDKKKIVNLLRQPHQIQNVSLVVIVGMGGLGKTALAQLIYSDKKVKDLFEKRMWVCVSENFDVKTILKNMLWSLTDHKSDDASSLEYLQNKLHDNLTGKRYLLVLDDVWNDSSVKWDNLRTYLMCGAQGSKVLVTTRLKTVAQTMGVSDPYVLKGLTQEKSWNLLKKIAFMDDTIRVDQTIESIGKKIAEKSKGVPLAIKSLGGILQSKSEVNEWIDVLRGDFWKLCEDKDNILP 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme8200g00001 406 Gene3D - 10 121 - -
Trme8200g00001 406 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 9 388 IPR039203 GO:0050832
Trme8200g00001 406 Pfam Rx N-terminal domain 11 92 IPR041118 -
Trme8200g00001 406 Coils Coil 28 55 - -
Trme8200g00001 406 Gene3D - 150 320 IPR027417 -
Trme8200g00001 406 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 402 IPR027417 -
Trme8200g00001 406 CDD RX-CC_like 7 127 IPR038005 -
Trme8200g00001 406 Gene3D - 326 403 IPR042197 -
Trme8200g00001 406 PRINTS Disease resistance protein signature 266 280 - -
Trme8200g00001 406 PRINTS Disease resistance protein signature 363 377 - -
Trme8200g00001 406 PRINTS Disease resistance protein signature 192 207 - -
Trme8200g00001 406 Pfam NB-ARC domain 170 389 IPR002182 GO:0043531
Trme8200g00001 406 FunFam Probable disease resistance protein At1g61300 149 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme8200g00001 Trme-Chr8200 61 1402 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme8200g00001 175 385 WRKY Transcription Factor Family AT5G45050 27.442 1.05e-08 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme8200g00001 - - tpra:123883200 562.377