Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme81997g00001 GAGCTAGAGTCAGATGATTTATTCTTGATATTTGCATCAGATGGCCTTTGGGAACAATTAAGTGATGAAGCCGCAGTTGATATTGTTTTCAAATATCCAAGAGCCGGAATTGCCAAGAGACTAGTAAGAGCTGCTCTTCAGGAAGCTGCAAAGAAAAGAGAGATGAGATATGCTGACATAAAGAAAATCGACAAAGGAATTAGACGACACTTCCATGACGATATAACTGTTATTGTAATCTATCTTGATCACCATGGAGGCTCTTCTAGTGATGGTGGATTTAAGCAAACTGCT 294 0.3912 ELESDDLFLIFASDGLWEQLSDEAAVDIVFKYPRAGIAKRLVRAALQEAAKKREMRYADIKKIDKGIRRHFHDDITVIVIYLDHHGGSSSDGGFKQTA 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme81997g00001 98 Pfam Protein phosphatase 2C 2 51 IPR001932 -
Trme81997g00001 98 SUPERFAMILY PP2C-like 3 84 IPR036457 -
Trme81997g00001 98 Gene3D - 1 88 IPR036457 -
Trme81997g00001 98 ProSiteProfiles PPM-type phosphatase domain profile. 1 82 IPR001932 -
Trme81997g00001 98 PANTHER PROTEIN PHOSPHATASE 2 81 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme81997g00001 Trme-Chr81997 379 763 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme81997g00001 1 91 PP2C-type Phosphatase Gene Family AT4G33920 76.923 1.83e-46 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme81997g00001 - K01102 gmx:100812137 159.844