Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme81709g00001 ATGCATCTTCTTAGATTCTTTGGAGTTTATCAAGTGTATACAGTAGAAGAAATGGACGAAAGTGAATCTCTTAAACTTTTCAGTTGGCATGCATTCAAGCAACCAAGTCCGAAAGAAGATTTTGCTACACATTCAACAGATGTGATTGCTTATTCTGGGAGATTGCCACTAGCACTTGAAGTCCTTGGGTCCTATTTGTCTGACTGTGAAATAACAGAGTGGCATAACGTTTTGGAGAAACTCAAATGTATTCCTCATGATCAAGTACATGAAAAACTAAAAGTAAGCTTTGATGGTTTAAAAGATGTTACAGAGAAACAAATATTCCTTGATATAGCTTGTTTCTTCATTGGGATGGACAAAAAGGATGTAATACAAATATTAAATGGGTGTGGGTTTTTTGCTGATATTGGAATTAAAGTCCTGGTTGAGCGAGCCCTTGTAACTGTTGACAATAAGAACAAGATTCAAATGCATGATTTGTTAAGAGACATGGGAAGACAAATAGTTTATGTGGAATCACCGACAGATCCTGAGAAGCGCAGTAGGTTGTGGCGCCACGAGGAAGTGTTTGATATATTAGCAAAGCGTAAGGTAATTACTAATTAG 609 0.3678 MHLLRFFGVYQVYTVEEMDESESLKLFSWHAFKQPSPKEDFATHSTDVIAYSGRLPLALEVLGSYLSDCEITEWHNVLEKLKCIPHDQVHEKLKVSFDGLKDVTEKQIFLDIACFFIGMDKKDVIQILNGCGFFADIGIKVLVERALVTVDNKNKIQMHDLLRDMGRQIVYVESPTDPEKRSRLWRHEEVFDILAKRKVITN 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme81709g00001 202 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 194 IPR044974 GO:0006952
Trme81709g00001 202 SUPERFAMILY "Winged helix" DNA-binding domain 88 194 IPR036390 -
Trme81709g00001 202 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 112 IPR027417 -
Trme81709g00001 202 Gene3D - 17 101 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme81709g00001 Trme-Chr81709 61 669 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme81709g00001 3 185 WRKY Transcription Factor Family AT5G45050 41.304 9.75e-34 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme81709g00001 - - mtr:11411578 340.887