Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme8160g00001 CAAGAAATTAAGTCAGACTCGAATTTCTCAGACGGTATAATTAGCGGTGATAAAGAGGAAAATTATTGTCCTGTTCGGGATGAGATAGTTACTGAAGGTGATACAGAATCTACAAAAGACGTACCTATTATAGAATCTTCCTCAGAACCAGTTGGCCTCAGTGCAAGAAATGAAGAACAAAGCCATAATATCTCCGAAAGTTCGGATTGTGCGGGATTTTCTCAATGTTTGGAGCAGGATGTAACAGAAGAAAACCAATCATCATCTCCACTTTCATCGACCTCTCACTCTTCAATCACTAGGGAAACTAAAGAGCAAGAGATTGTCACTGATGTGTCTGCGCGACCAAGTCCAGTGTCTGTTCTTGATGCACCATTCTTAGAGGATGATGCCACCTCTGCGAACTCTAGATGTCAACCTGCTGAAGTACCGGTGCGGCCGCTACATGTTCAATTTGACGAGCAAGATTCTTCTCTTGTGAATGAAATCAAGAGGGCAAAATATTGTATCGAAGAAAATGAATCAATATATGTTTACATCGAAGCAGTCCTGCAAGCCTCTGGATTGACAAGAGATCAATTGTTGATGAAATGTCTTTCCTCCGACAAGATACTAGATCCTTCCTTGTTTGATCAGGTAGAATTATCACCAAACCGGCTTTGCCATGACCCGAAACTCCTATATGACTGTATCAATGAAATTCTCATGGAG 711 0.4121 QEIKSDSNFSDGIISGDKEENYCPVRDEIVTEGDTESTKDVPIIESSSEPVGLSARNEEQSHNISESSDCAGFSQCLEQDVTEENQSSSPLSSTSHSSITRETKEQEIVTDVSARPSPVSVLDAPFLEDDATSANSRCQPAEVPVRPLHVQFDEQDSSLVNEIKRAKYCIEENESIYVYIEAVLQASGLTRDQLLMKCLSSDKILDPSLFDQVELSPNRLCHDPKLLYDCINEILME 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme8160g00001 237 Pfam Domain of unknown function (DUF4378) 178 237 IPR025486 -
Trme8160g00001 237 MobiDBLite consensus disorder prediction 1 114 - -
Trme8160g00001 237 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 1 237 - -
Trme8160g00001 237 MobiDBLite consensus disorder prediction 20 39 - -
Trme8160g00001 237 MobiDBLite consensus disorder prediction 40 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme8160g00001 Trme-Chr8160 80 1839 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme8160g00001 75 237 TRM (TON1 Recruiting Motif) Superfamily AT2G45900 41.818 3.44e-26 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme8160g00001 - - tpra:123883590 414.846