Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme81595g00001 ATAATTGCCGGCGACCCTGAGAGTGTCACCGAGACATGGATGAGCAATGTTTATAGTTTCGGCATGGTAATTTGGGAGATGGTATCCGGTGAAGCAGCCTATACTGCATATTCACCTGTGCAGGCAGCAGTAGGCATTGCAGCTTGTGGCCTTAGACCTGAGATCCCAAAGGACTGTCCACAAATTCTAAAATCTCTAATGACAAAATGCTGGAACAACACCCCTTCAAAACGCCCCGAATTCTCCGAAATAATAGCGATATTGCTGCGAAACAACAATAATAG 284 0.4542 IIAGDPESVTETWMSNVYSFGMVIWEMVSGEAAYTAYSPVQAAVGIAACGLRPEIPKDCPQILKSLMTKCWNNTPSKRPEFSEIIAILLRNNNN 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme81595g00001 94 Pfam Protein tyrosine and serine/threonine kinase 12 87 IPR001245 GO:0004672|GO:0006468
Trme81595g00001 94 Gene3D Transferase(Phosphotransferase) domain 1 5 94 - -
Trme81595g00001 94 ProSiteProfiles Protein kinase domain profile. 1 94 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme81595g00001 94 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 15 88 - -
Trme81595g00001 94 SUPERFAMILY Protein kinase-like (PK-like) 12 88 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme81595g00001 Trme-Chr81595 123 406 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme81595g00001 15 88 MAP Kinase Kinase Kinase AT5G58950 47.297 8.31e-23 89.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-7 Trme81595g00001 PK_Tyr_Ser-Thr 3.8e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme81595g00001 - - qsa:O6P43_020389 185.267