Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme8158g00001 CAAGTCGTCGAAGATATGAAAAGAGGTTTCAAATGCAATAACCAAGCTTTTAGCTCCGTGTCGTCAGAGAATTTCATTGACCCACTTGTGAGGTTTCTGAGCACTGCATATGATAAGCATGACACAAAAGCCCTGAGAAGTGGAAGTCAGTTGCTGTTGGAATTTACAAAGTACTGCAGAAATTGTGTGACAAACTTAAGTGAAGATACATGCAGTGTATTGGCAAGTCTCCTAGAGTCAGACGTGATTGGAGAAGCTCTTGCCATATTGGAAACATTGTCGAACCAGTGGTCCAATAAAGCTAACGTTGCAGCTTCCAGTGCACTAACCTCTATTTCGAAGATCCTTGATTCTGTACTTGGCTCTGACACCGACGAAGAAAAGGAACCGGCACTAGCTATTGTACTCTCTTTGTGCTCTCAAAGCTTGGAATATTGTGAGCTGGTTATGTACGAGGGTATTATACCATATCTTGTCAATATCTCCAATAAGGGAAACGATAACACAAAGGTGAAAGCGGTTGAACTACTCCGACTTTTGAGGGAAGTTGAGCCAAATCTCAACAACTCTCGAGATTCTAACGAGGATCACTTTGAAGAAAAGAAACCGTCAAAGAAGTCCAGCACAATTTTTAAGAAGCTATTCGGAAAATCAAGTTCAGATTCATCAAATAACAAGAGATGA 684 0.4094 QVVEDMKRGFKCNNQAFSSVSSENFIDPLVRFLSTAYDKHDTKALRSGSQLLLEFTKYCRNCVTNLSEDTCSVLASLLESDVIGEALAILETLSNQWSNKANVAASSALTSISKILDSVLGSDTDEEKEPALAIVLSLCSQSLEYCELVMYEGIIPYLVNISNKGNDNTKVKAVELLRLLREVEPNLNNSRDSNEDHFEEKKPSKKSSTIFKKLFGKSSSDSSNNKR 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme8158g00001 227 Gene3D - 10 194 IPR011989 -
Trme8158g00001 227 SUPERFAMILY ARM repeat 19 181 IPR016024 -
Trme8158g00001 227 MobiDBLite consensus disorder prediction 188 207 - -
Trme8158g00001 227 MobiDBLite consensus disorder prediction 211 227 - -
Trme8158g00001 227 MobiDBLite consensus disorder prediction 188 227 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme8158g00001 62 184 U-box Gene Family AT4G36550 36.220 1.27e-11 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme8158g00001 - - gmx:100798951 169.859