Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme81542g00001 AGGCCGAATGAACCACTTGTACTTCACGGTATCACTTGCACATTTGAAGGAGGGCACAAGATTGGTATTGTTGGTAGAACAGGCAGCGGAAAATCCACTCTGATAGGTGCTTTGTTTCGTCTTGTGGAGCCGGCNNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNAGCCTTAATGATTTGAGGTCAAGTTTTGGTATTATACCTCAGGATCCTACCCTTTTCATTGGGACAGTTAGATATAACTTAGACCCTTTATCTCAACATTCTGATCAAGAAATATGGGAGGTTCTTCAAAAGTGTCAGTTGCGAGAGTCTGTCAAAGATAAAGGAGGCTTAGATTCCTCAGTTGTCGAAGATGGATCAAACTGGAGCATTGGACAAAGGCAACTATTCTGTTTAGGGCGTGCGCTTTTGAGGCGAAATAAGATATTGGTGCTTGACGAAGCAACTGCATCAATTGATAATGCAACTGATTTGATTCTTCAGAATATCATTAGAAAAGAGTTTGCTGATTGTACAGTGATAACAGTAGCACATAGGATACCGACTGTGATGAATTGCAACATGGTTCTTTCCATAAGC 594 0.3838 RPNEPLVLHGITCTFEGGHKIGIVGRTGSGKSTLIGALFRLVEPAXXXXXXXXXXXXXXSLNDLRSSFGIIPQDPTLFIGTVRYNLDPLSQHSDQEIWEVLQKCQLRESVKDKGGLDSSVVEDGSNWSIGQRQLFCLGRALLRRNKILVLDEATASIDNATDLILQNIIRKEFADCTVITVAHRIPTVMNCNMVLSIS 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme81542g00001 198 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 1 196 - -
Trme81542g00001 198 Pfam ABC transporter 8 155 IPR003439 GO:0005524
Trme81542g00001 198 CDD ABCC_MRP_domain2 1 195 - -
Trme81542g00001 198 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 197 IPR027417 -
Trme81542g00001 198 Gene3D - 1 198 IPR027417 -
Trme81542g00001 198 FunFam ATP-binding cassette (ABC) transporter, putative 1 198 - -
Trme81542g00001 198 SMART AAA_5 17 198 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme81542g00001 Trme-Chr81542 1 766 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme81542g00001 2 197 Calmodulin-binding Proteins AT2G36910 28.218 2.73e-20 86.3