Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme814818g00001 ATGTTTCCAGCACCTCAGATTGGAAACACTGAAATGCCACCAGAAGATGGCTTCACTTGGAGAAAATATGGACAAAAAGAGATACTAGGCCGCAAGTATCCAAG 104 0.4327 MFPAPQIGNTEMPPEDGFTWRKYGQKEILGRKYP 34
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme814818g00001 34 MobiDBLite consensus disorder prediction 1 21 - -
Trme814818g00001 34 SUPERFAMILY WRKY DNA-binding domain 11 34 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trme814818g00001 34 Pfam WRKY DNA -binding domain 15 34 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trme814818g00001 34 Gene3D WRKY domain 5 34 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trme814818g00001 34 ProSiteProfiles WRKY domain profile. 15 34 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme814818g00001 1 34 WRKY Transcription Factor Family AT2G40740 58.824 2.15e-10 50.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Trme814818g00001 WRKY 9.2e-07 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme814818g00001 - - mtr:11424132 76.2553