Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme814482g00001 ATGCGTATCATCAACGAACCCACTGCTGCTGCCCTTGCCTATGGTCTTGATATGGAGCCCATCGTTGATGATGAGGATGAGAGGAACGTTTTGATTTTTGACCTTGGTGGCGGTACTTTTGATGTCTCTCTTCTATCCATTGCAGACAGTGTCTTTCAAGTTCTTGCCACTGCAGGAGACAGCCATCTTGGAGGTGAAGACTTCGATAACAGGATGGTTG 220 0.4727 MRIINEPTAAALAYGLDMEPIVDDEDERNVLIFDLGGGTFDVSLLSIADSVFQVLATAGDSHLGGEDFDNRMV 73
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme814482g00001 73 Pfam Hsp70 protein 1 73 IPR013126 GO:0005524|GO:0140662
Trme814482g00001 73 SUPERFAMILY Actin-like ATPase domain 25 73 IPR043129 -
Trme814482g00001 73 PANTHER HEAT SHOCK PROTEIN 70KDA 1 73 IPR013126 GO:0005524|GO:0140662
Trme814482g00001 73 ProSitePatterns Heat shock hsp70 proteins family signature 2. 32 45 IPR018181 -
Trme814482g00001 73 Gene3D - 1 27 - -
Trme814482g00001 73 Gene3D - 28 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme814482g00001 Trme-Chr814482 20 239 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme814482g00001 1 73 Calmodulin-binding Proteins AT5G02500 73.973 5.52e-30 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme814482g00001 K03283 - cqd:128702169 114.005