Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme81438g00001 ATAGCTAGAGAAGGAGACCCAGTTCAAAGAATGTTATTTGTAGTGAGGGGTCACCTTCAAAGCAGCCAAGTTCTAAGAGATGGGTTGAAAAGTTATTGCATGTTAGGACCAGGAAACTTCACTGGGGATGAGCTCCTTTCATGGTGTTTGAGGAGACCCTTTATAGAGCGACTTCCATTGTCAACGTCAACACTTGTCACACTTGAAACAACAGAGGCTTTTGGTCTTGAAGCTGAGGATGTGAAGTATGTGACACAACATTTCAGGTAA 270 0.4296 IAREGDPVQRMLFVVRGHLQSSQVLRDGLKSYCMLGPGNFTGDELLSWCLRRPFIERLPLSTSTLVTLETTEAFGLEAEDVKYVTQHFR 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme81438g00001 89 Gene3D Jelly Rolls 1 89 IPR014710 -
Trme81438g00001 89 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 1 89 - -
Trme81438g00001 89 ProSiteProfiles cAMP/cGMP binding motif profile. 1 53 IPR000595 -
Trme81438g00001 89 SUPERFAMILY cAMP-binding domain-like 1 88 IPR018490 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme81438g00001 Trme-Chr81438 3 272 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme81438g00001 1 89 Ion Channels AT5G54250 87.640 1.36e-50 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme81438g00001 K05391 - egr:104450166 165.622