Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme81308g00001 ATGGTGAGGGAAAGTAGAGTGACAGCAGAGAGTGTGGTTTACAGTTTTGGAACTCTATTGCTTGATCTCTTGAGTGGTAAACATATTCCCCCAAGCCATGCACTTGACCTGATACGCGGCAAAAACTATTTGATGTTGATGGATTCTGCATTAGAAGGTCACTTTTCAAAGGATGATGGAACCGAGTTAGTTCGTTTGGCTTCTCGTTGCTTACAATATGAAGCTCGTGAGAGGCCAAATGCCAAGTCTCTTGTTGAAACTCTTATGTCACTTCAAAAAGAAATAGAG 288 0.4167 MVRESRVTAESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNYLMLMDSALEGHFSKDDGTELVRLASRCLQYEARERPNAKSLVETLMSLQKEIE 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme81308g00001 96 Gene3D Transferase(Phosphotransferase) domain 1 1 96 - -
Trme81308g00001 96 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 2 96 IPR045845 GO:0004672|GO:0009742
Trme81308g00001 96 SUPERFAMILY Protein kinase-like (PK-like) 3 92 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme81308g00001 Trme-Chr81308 14 549 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme81308g00001 10 96 Receptor kinase-like Gene Family AT4G02010 34.343 1.65e-09 51.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Trme81308g00001 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme81308g00001 - - pop:7486542 172.17