Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme81201g00001 ATGGACAAAAGTAGTATAGATGATGTTGTCCTTGTTGGTGGATCTTCTAGGATTCCAAAAGTGAAGCAACTGCTGCATGACTTCTTCATGGGGAAGGAGTTGTCCAAGAGCATCAACCCTGATGAGGCTGTTGCTTACGGTGCAGCTGTTCAGGCTGCTTTGTTGACTGATGGCTTTAAAAATGTTCCCAATATGGTGCTTCGAGATGTTACACCGTTGTCTCTAGGCAAGGAAGATGTAGGAGATATTATGAGTGTGGTGATTCCTAGGAACACTTCTATTCCTGTAAAGAAGACAAACACTTATGTTACTGTGAATGATAACCAATCCTTTGTCTTGATTGAGGTTTATGAGGGTGAGAGAATAATAGCCAGTGAAAACAATTTGCTGGGTTTTTTCAGAATCTCAATTCCTCTTGCACCTCGCGGCCTTCCTATCAAAGTATGTTTTTCTATAGATGTTGATGGTATATTAAACGTCTCTGCAGAGGAAGAAACAAGTGGTAATAAGAAAGACATTACAATAACAAATGAAAATGGAAGACTGTCAAGAGAAGAAATTGATAGAATGATCCAGGAAGCTGAGAATTTCAAGGCTCAAGACATGAAGTTCAAGAAGAAAGTTGAAGCACGAAATGCTTTGGATGATTATCTTTACAATGTGAGGAAAGTAATGAAGGATGATAGTGTTAGTTCCAAGCTCACCCCTGTAGACAAAGTGAAGATAAATTCTGCAATGATAAAGGGAA 748 0.3904 MDKSSIDDVVLVGGSSRIPKVKQLLHDFFMGKELSKSINPDEAVAYGAAVQAALLTDGFKNVPNMVLRDVTPLSLGKEDVGDIMSVVIPRNTSIPVKKTNTYVTVNDNQSFVLIEVYEGERIIASENNLLGFFRISIPLAPRGLPIKVCFSIDVDGILNVSAEEETSGNKKDITITNENGRLSREEIDRMIQEAENFKAQDMKFKKKVEARNALDDYLYNVRKVMKDDSVSSKLTPVDKVKINSAMIKG 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme81201g00001 249 Gene3D - 1 38 - -
Trme81201g00001 249 Gene3D - 39 52 - -
Trme81201g00001 249 ProSitePatterns Heat shock hsp70 proteins family signature 3. 9 23 IPR018181 -
Trme81201g00001 249 Gene3D - 183 248 IPR029048 -
Trme81201g00001 249 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 53 180 IPR029047 -
Trme81201g00001 249 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 209 245 IPR029048 -
Trme81201g00001 249 Pfam Hsp70 protein 2 245 IPR013126 GO:0005524|GO:0140662
Trme81201g00001 249 SUPERFAMILY Actin-like ATPase domain 2 55 IPR043129 -
Trme81201g00001 249 PRINTS 70kDa heat shock protein signature 6 22 - -
Trme81201g00001 249 PRINTS 70kDa heat shock protein signature 38 58 - -
Trme81201g00001 249 PRINTS 70kDa heat shock protein signature 143 159 - -
Trme81201g00001 249 PRINTS 70kDa heat shock protein signature 64 83 - -
Trme81201g00001 249 FunFam 70 kDa heat shock cognate protein 54 228 - -
Trme81201g00001 249 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 61 215 IPR029047 -
Trme81201g00001 249 PANTHER HEAT SHOCK PROTEIN 70KDA 1 239 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme81201g00001 Trme-Chr81201 1 748 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme81201g00001 1 246 Calmodulin-binding Proteins AT3G12580 63.052 2.09e-103 311