Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme81140g00001 GATTTAGAAGCCGTGTTAATTTTGCATCCTGAAATAGATGATGCTGCTGTTACAGCTGCCAAAGATGAAGAAACTGGGGAGATTCCAGTTGCGTTTGTGGTCAAGAAGNTTGGAAGTGTACTTTCTCCGAAGCATGTTATCGATTATGTTGCTGAGCAGGTTGCTCCATACAAGAAAGTTCGGAAAGTGTTCTTCACCGACAAGATACCAAGGTCTCCAACTGGGAAGATCCTCCGAAAGGAACTCAAGCATTGCTTGACTTCTAAACTCTAA 273 0.4286 DLEAVLILHPEIDDAAVTAAKDEETGEIPVAFVVKKXGSVLSPKHVIDYVAEQVAPYKKVRKVFFTDKIPRSPTGKILRKELKHCLTSKL 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme81140g00001 90 Pfam AMP-binding enzyme C-terminal domain 2 76 IPR025110 -
Trme81140g00001 90 FunFam 4-coumarate--CoA ligase 2 1 89 - -
Trme81140g00001 90 SUPERFAMILY Acetyl-CoA synthetase-like 2 85 - -
Trme81140g00001 90 Gene3D - 1 89 IPR045851 -
Trme81140g00001 90 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 1 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme81140g00001 Trme-Chr81140 296 768 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme81140g00001 1 90 Monolignol Biosynthesis Gene Families AT4G19010 66.667 4.38e-33 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme81140g00001 K01904 - gmx:100804808 149.058