Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme8109g00001 ATGTACACCAAGAGTTCTGATTCTCATTTATGTTCAGGAGTTGATACTCACGGCATCCTTCTTTTCAGAACTTTGATTGGAAAGGTATTTGGAAGCATTGGTTCAGTGGGGGGAGGCCTCGCTTTGGGTAAAGAAGGTCCTTTAGTCCATACTGGTGCTTGTATTGCTTCTTTGCTTGGACAAGTAAGGACTTAA 195 0.4256 MYTKSSDSHLCSGVDTHGILLFRTLIGKVFGSIGSVGGGLALGKEGPLVHTGACIASLLGQVRT 64
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme8109g00001 64 Pfam Voltage gated chloride channel 17 60 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Trme8109g00001 64 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 13 63 - -
Trme8109g00001 64 SUPERFAMILY Clc chloride channel 14 62 IPR014743 -
Trme8109g00001 64 Gene3D Clc chloride channel 7 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme8109g00001 Trme-Chr8109 1382 1677 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme8109g00001 12 61 Ion Channels AT5G26240 88.000 7.01e-24 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme8109g00001 K05016 - dct:110110988 101.293