Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme8107g00001 ATGAAGTTAATGCACTGCCATGAACTGTGCAAGCCAGTTACTATCTTGATTCTAGTTAACTTAGCTCTTGCTTTTGTCAATTTACTTCTTAAAATGGTTCTCAATGAAGGAATGGATTACATGTCCATTGTAACATATCGACAAGCTATTTCATTTATCTTCATGGCACCTATTGCATGGTTCTATGAAAGGAAACACAAATTGGAGGCTCACATAATATGTCTCCTTTTTCTCTCTGCTCTTGTCGGAGTAACAATCCCCCAATACTTGTTTCTTCTTGGACTTCAGTATACATCTGCTACATTCTCTTGTGCATTCCTCAACATGGTGCCTGTATTTACATTCATCATGTCAGTTCCATTTGGGATAGAGAAGGTGAACATGAAAAGCAAGAGTGGTAAAGCCAAAATCTTGGGAACTATTGTGTGCATTGGTGGAGTTTTGATATTAGCCTTTTATAAAGGAATTTCCTTGAACAGCCCACAATCTCAACACATAGACAATAGATATACAAGTTCACCTCCCAAGTTAGAGAAATGGATTATAGGTTCAATACTTCTGACTGTAGGTTGCATCATGTGGTCTTCTTGGTTTGTTATACAAGCTAAGATTAGCAAAAGGTATCCATGTCAATACTCTAGCACTGCTATTTTGTCACTTTTTGCTGCTATTCAATCAGCAATATTAACTTTGGTCATCAAGAGAAACAATGCCTCATGGATCCTCAAAGGAAAGCTAGAAATATTGTGTGTAATATATGCTTCAAAAATCTCACGCAGTCAACACATTGTGATCGTTGAATCTAGATTGGACAGTCAGATTTCAAGCTCGGTATTTTAG 840 0.3702 MKLMHCHELCKPVTILILVNLALAFVNLLLKMVLNEGMDYMSIVTYRQAISFIFMAPIAWFYERKHKLEAHIICLLFLSALVGVTIPQYLFLLGLQYTSATFSCAFLNMVPVFTFIMSVPFGIEKVNMKSKSGKAKILGTIVCIGGVLILAFYKGISLNSPQSQHIDNRYTSSPPKLEKWIIGSILLTVGCIMWSSWFVIQAKISKRYPCQYSSTAILSLFAAIQSAILTLVIKRNNASWILKGKLEILCVIYASKISRSQHIVIVESRLDSQISSSVF 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme8107g00001 279 PANTHER WAT1-RELATED PROTEIN 12 258 IPR030184 GO:0016020|GO:0022857
Trme8107g00001 279 Pfam EamA-like transporter family 14 150 IPR000620 GO:0016020
Trme8107g00001 279 SUPERFAMILY Multidrug resistance efflux transporter EmrE 46 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme8107g00001 Trme-Chr8107 316 1557 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme8107g00001 8 254 Nodulin-like Gene Family AT3G30340 45.817 5.32e-81 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme8107g00001 - - gmx:100802053 418.698