Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme810635g00001 GGTAGTCCATGGTACGGTCCAGACCGTGTCAAGTATTTGGGTCCATTCTCTGGTGAAGCCCCATCCTACCTCACTGGTGAATTTCCTGGTGACTATGGTTGGGACACTGCTGGACTTTCTGCTGATCCAGAGACTTTTTCCAAAAACCGTGAACTCGAGGTCATCCATAGTAGATGGGCTATGTTGGGTGCCTTGGGATGTGTCTTCCCTGAGCTCTTGGCTCGTAATGGTGTCAAATT 239 0.4979 GSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLARNGVK 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme810635g00001 79 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 79 IPR001344 GO:0009765|GO:0016020
Trme810635g00001 79 Pfam Chlorophyll A-B binding protein 20 76 IPR022796 -
Trme810635g00001 79 SUPERFAMILY Chlorophyll a-b binding protein 3 77 - -
Trme810635g00001 79 Gene3D Chlorophyll a/b binding protein domain 11 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme810635g00001 Trme-Chr810635 1 239 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme810635g00001 1 79 Chloroplast and Mitochondria Gene Families AT1G29930 94.937 3.53e-52 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme810635g00001 K08912 - egt:105965899 173.326