Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme81005g00001 ATGATATTGCAGGAAAGACTTAGCCAGCAAAGGATATTTCTTGTAGTGGACGATGTGAATGAACTGGACCAATTGAATGCTTTGTGCGGAAGTCGTGAATGGTTTGGTCAAGGAAGTATAATAATTATCACAACGAGAGATTATGATTTACTTAGCAGGCTTGAAGTTGACTATGTGTATACCATGAAAGAAATGGATAACAACGAGTCTCTTGAACTTTTTAGTTGGCATGCCTTCAAGGAACGAAGTCCTATCGATGGTTTTGCTGAACTTTGTAGAGATTTTATAAAGTACTCTGGTGGATTGCCGCTAGCTCTTCAAGTCATTGGGTCCTTTTTGATGACTAGGAGAAGAAAAAAAGAATGGAAAAGTGTTTTGGAGAAACTCAAACTCATTCCCAATGAGAAAGTGTTGGAGAAACTTAGAATAAGTTTTGATGGTTTAAGTGATGATGATATCAAAGAAATATTCCTTGACATTTCTTTCTTCTTTATTGGGATGGACCAGGAAGATGTAACTAAAATATTGAAAGACTGTGGGCATTATGCAGATATTGGAATAAGTGTCCTTGTACAAAGAAGTCTTGTAACTGTTGATAGGAATAACAAGATTGGAATGCATGATTTGCTACAAGACATGG 640 0.3641 MILQERLSQQRIFLVVDDVNELDQLNALCGSREWFGQGSIIIITTRDYDLLSRLEVDYVYTMKEMDNNESLELFSWHAFKERSPIDGFAELCRDFIKYSGGLPLALQVIGSFLMTRRRKKEWKSVLEKLKLIPNEKVLEKLRISFDGLSDDDIKEIFLDISFFFIGMDQEDVTKILKDCGHYADIGISVLVQRSLVTVDRNNKIGMHDLLQDM 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme81005g00001 213 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 213 IPR044974 GO:0006952
Trme81005g00001 213 SUPERFAMILY "Winged helix" DNA-binding domain 136 213 IPR036390 -
Trme81005g00001 213 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 160 IPR027417 -
Trme81005g00001 213 Gene3D - 1 58 IPR027417 -
Trme81005g00001 213 Pfam NB-ARC domain 3 130 IPR002182 GO:0043531
Trme81005g00001 213 Gene3D - 64 149 IPR042197 -
Trme81005g00001 213 PRINTS Disease resistance protein signature 99 113 - -
Trme81005g00001 213 PRINTS Disease resistance protein signature 6 20 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme81005g00001 Trme-Chr81005 1 640 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme81005g00001 2 213 WRKY Transcription Factor Family AT5G45050 35.849 4.57e-38 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme81005g00001 - - tpra:123891787 361.688