Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme80974g00001 TGGGGACCAAATGCAGATGCACTATCATCTGATGTAATAGCTGCAATTGATGCCGCAATAGTGGACGGTGTTGATGTTCTTTCAATATCACTAGGCTATAACAATGTGCCTTTGTATGAAGATGCTATTGCTATAGCAACATTTGCAGCTATGGAAAAAGGTGTTTTNNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNAAACTCTTCACAATGGAACACCATGGGTGACAACTGTTGCTGCTGGCACTCTGGATCGCGAATTTCGGGGGAATCTTTCACTTGGTAATGGAGTCTCAGTCACTGGTTTCGCTTCTTATCTAGGAATCTTCTCCGATAGTAATATTCCAATTGTTTTCATGGGTATGTGTGATAATATTACTGAACTAATCAAAGTGAAGAGAAAGATTGTGGTTTGTGAAAACAATAATGGAACTCTTTTTAGCCAATTTTTTAATGTGGCTGAAGCAAAAGTTATTGGAGCTGTTTTCATATCAAACACATCAGAAATTGAACTGTCAGAACTCTTATGGAACCCGCTTCCATCCATCATTATTAATCAGAAATATGGAGAAATTGTCAAAGATTACATACAAAGTAACTCTAACTCTAGTTCAGTAGCAAAAATGTATTTCAAGATAACATCTTTCGGTGTTAAACCAACACCTAGTGTTGATTATTATAGTTCAAGAGGGCCTTCAAAGAGTTGTCCATATGTTTTGAAACCTGACATTACAGGTCCTGGTACATCAATCTTAGCTG 766 0.3538 WGPNADALSSDVIAAIDAAIVDGVDVLSISLGYNNVPLYEDAIAIATFAAMEKGVXXXXXXXXXXXXXXTLHNGTPWVTTVAAGTLDREFRGNLSLGNGVSVTGFASYLGIFSDSNIPIVFMGMCDNITELIKVKRKIVVCENNNGTLFSQFFNVAEAKVIGAVFISNTSEIELSELLWNPLPSIIINQKYGEIVKDYIQSNSNSSSVAKMYFKITSFGVKPTPSVDYYSSRGPSKSCPYVLKPDITGPGTSILA 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme80974g00001 255 Gene3D - 87 219 - -
Trme80974g00001 255 Gene3D Peptidase S8/S53 domain 8 255 IPR036852 GO:0004252|GO:0006508
Trme80974g00001 255 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 8 255 IPR045051 -
Trme80974g00001 255 CDD PA_subtilisin_like 93 204 - -
Trme80974g00001 255 SUPERFAMILY Subtilisin-like 6 254 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme80974g00001 Trme-Chr80974 3 768 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme80974g00001 8 255 Subtilisin-like Serine Gene Family AT2G05920 37.066 3.84e-44 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme80974g00001 - - lja:Lj0g3v0171039.1 280.411