Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme8094g00001 GCGGGAATCCGCACTTTTCTTGACGATAAAGAGCTTAGAAAGGGAGAAGAGCTGGGACCAGCACTAAAGAAAGCAATAGAAGAGTCTCATATAGCTATTGTTGTTTTATCAGAGAACTATACAGAATCTAGCTGGTGTGTAGAAGAACTGGTACACATCATGGAATGTTACGATACTTATGGTAATAATGAAGATCTGTTGTCCAAGTGGAGGCCCGCACTCACCCAAGTTGCAAATCTATCAGGCTGGGATGCCAACAATTTCGGAAGGACTGAAACTGAACTGGTAACTAGAATCGTTGAGGACATTTTGACAAAACTAGATACCTCATTCTTGTCTATTACTGACTATCCAATTGGATTGGAGTCCCGCGTGCGACACATTACCAAGTTTATTGATGGTCAATCACATAAAGTCTGTATGATAGGGATATGGGGAATGGGTGGATCCGGGAAAACAACCACGGCTAAAGCTATCTACAATCAAATCCATCGTCAATTTAAGGGTAAAACAAGTTACATTGAAAGTATTCGAAAAGTTTGTGATAATAATAGTAGAGGGATTATTCAGTTACAACAACAACTTCTTTTAGATCTCCTGAAAGAAAAGAAGGAGATTCATAGCATTGCATTGGGGATAAATTATATTGCGAAAAGACTTCGGGGACAAAAGGCTTTCGTCGTACTTGATGATGTGACCAAGTATGAGCAATTACAAGCCCTGTGTCGAAATCCTAAGCTGCTTGATGTGGTTGCTTATTGCGGAGGATTACCACTGGCTCTTGAAGTCCTTGGATGTTACTTATCTAAGAGGCCGGAAGAAGAATGGAGAAGTGTGCTATCAAAATTAGAGAAAATTCCCAACGATCAAGTGCTAGAGAAACTTAGAATCAGCTATGATGGTTTAAAAGATCATATGGAAAAGGATATATTTCTTGACATATGTTGTTTCTTCATTGGAAAGAACAGAGCTGATGTTACACAGATACTTAATGGCTGTGGACTTCATGCTGATATTGGAATAGCTGTCCTCATAGAGCGTGGCCTTGTAAAAGTTGAAAAGAATAACAAGCTTCAAATGCATGATTTGCTACGTGACATGGGAAGAGAAATTGTTCGCGAAAGTTCACCAAATAAGGCTGCAAATCAGAGTCGATTGTGGCGTTATGAGGATGTGCTGCATGTTTTGTCAAAAGAAACTGCTGCTATATCTCAGTAG 1218 0.3966 AGIRTFLDDKELRKGEELGPALKKAIEESHIAIVVLSENYTESSWCVEELVHIMECYDTYGNNEDLLSKWRPALTQVANLSGWDANNFGRTETELVTRIVEDILTKLDTSFLSITDYPIGLESRVRHITKFIDGQSHKVCMIGIWGMGGSGKTTTAKAIYNQIHRQFKGKTSYIESIRKVCDNNSRGIIQLQQQLLLDLLKEKKEIHSIALGINYIAKRLRGQKAFVVLDDVTKYEQLQALCRNPKLLDVVAYCGGLPLALEVLGCYLSKRPEEEWRSVLSKLEKIPNDQVLEKLRISYDGLKDHMEKDIFLDICCFFIGKNRADVTQILNGCGLHADIGIAVLIERGLVKVEKNNKLQMHDLLRDMGREIVRESSPNKAANQSRLWRYEDVLHVLSKETAAISQ 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme8094g00001 405 SUPERFAMILY "Winged helix" DNA-binding domain 290 396 IPR036390 -
Trme8094g00001 405 Gene3D - 63 114 IPR035897 -
Trme8094g00001 405 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 8 243 IPR044974 GO:0006952
Trme8094g00001 405 Pfam TIR domain 2 58 IPR000157 GO:0007165
Trme8094g00001 405 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 83 IPR035897 -
Trme8094g00001 405 PRINTS Disease resistance protein signature 141 156 - -
Trme8094g00001 405 PRINTS Disease resistance protein signature 219 233 - -
Trme8094g00001 405 SMART till_3 2 114 IPR000157 GO:0007165
Trme8094g00001 405 ProSiteProfiles TIR domain profile. 1 107 IPR000157 GO:0007165
Trme8094g00001 405 Gene3D - 119 224 IPR027417 -
Trme8094g00001 405 Pfam NB-ARC domain 123 242 IPR002182 GO:0043531
Trme8094g00001 405 Gene3D - 1 62 IPR035897 -
Trme8094g00001 405 Gene3D - 225 310 IPR042197 -
Trme8094g00001 405 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 107 314 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme8094g00001 Trme-Chr8094 1 1619 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme8094g00001 119 387 WRKY Transcription Factor Family AT5G45050 30.982 3.74e-32 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme8094g00001 - - tpra:123923859 602.438