Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme80885g00001 ATTGCATTTGGGAGGAGGTATGAAGATGAAGGAGTAGAGAGAAGTAAATTCCAGGGAATGATGCCCGAGTTGGAAGCCATGTTGACGGCTTTCTTTGTTTCTGATTATATTCCATTCATGGGATGGATTGATAAACTGTCGGGACTTCGTGCGCGTCTCGAACGAATTTTCAAGGAGATGGATGAGTTTTACCAAAAAGTTATTGATGAACATTTGGATCCAAATAGACAAAATACAGATGAAGAGGTTAATTTTGTTGATGTCTTACTCCAATTGAAGAAACAAACATTTGTTTTCATTTGA 303 0.3762 IAFGRRYEDEGVERSKFQGMMPELEAMLTAFFVSDYIPFMGWIDKLSGLRARLERIFKEMDEFYQKVIDEHLDPNRQNTDEEVNFVDVLLQLKKQTFVFI 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme80885g00001 100 SUPERFAMILY Cytochrome P450 1 95 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme80885g00001 100 Gene3D Cytochrome P450 1 97 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme80885g00001 100 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 1 96 - -
Trme80885g00001 100 Pfam Cytochrome P450 1 93 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme80885g00001 Trme-Chr80885 59 361 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme80885g00001 2 94 Cytochrome P450 AT4G31500 44.086 9.40e-23 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme80885g00001 - - lja:Lj3g3v1475690.1 142.51