Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme808641g00001 ATCTGTGACTCATGGCTTGAGGAATATGGCGACTTCGACAAAGTTTTCCTCATAGGAGATAACTCGGGAGGAAATTTTGTCCACGAAGTAGCAGCTAGAGCCGGTTCGACTGACTTGAGCCCTGTTCGACTCGCAGGAGCAATTCCAATCCATCCTGCGTTTGTTAGGTCAATCTGA 177 0.4802 ICDSWLEEYGDFDKVFLIGDNSGGNFVHEVAARAGSTDLSPVRLAGAIPIHPAFVRSI 58
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme808641g00001 58 Gene3D alpha/beta hydrolase 2 57 IPR029058 -
Trme808641g00001 58 Pfam alpha/beta hydrolase fold 5 53 IPR013094 GO:0016787
Trme808641g00001 58 SUPERFAMILY alpha/beta-Hydrolases 5 54 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme808641g00001 Trme-Chr808641 3 179 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme808641g00001 2 54 Carbohydrate Esterase AT1G49640 45.283 2.83e-12 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme808641g00001 - - lja:Lj0g3v0128689.1 98.5969