Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme80807g00001 AACGGTAAAGGCAATGGATTGAGAATAAGTGATGGGATGATGGGTAGGGGGAAAGTGAAAGCTCAAGAAGTTATTGAAGCAGTAAAACGTGGTACTAATATGGAGCCGTTTGATGTGGTTTACTATCCTCGAGCAGGTACTCCCGAGTTCTTTGTGAAAATTTCTTTAATTGGAAAAGCACTTCAGATTAGATGGTGTCATGGAATGAGATTCAAGATGGCCATCGAAACTGAGGACTCATCGAGGATAAGTTGGTTTGTCGGAACTGTTGTTTCTGTTCAGGCTTCTGATCCAGCATGGCCTGAATCTTTTTGGAGATTTCTCCAGGTATAG 333 0.4204 NGKGNGLRISDGMMGRGKVKAQEVIEAVKRGTNMEPFDVVYYPRAGTPEFFVKISLIGKALQIRWCHGMRFKMAIETEDSSRISWFVGTVVSVQASDPAWPESFWRFLQV 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme80807g00001 110 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 23 110 IPR044835 GO:0003677|GO:0006355|GO:0009725
Trme80807g00001 110 Pfam Auxin response factor 32 109 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Trme80807g00001 110 Gene3D - 57 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme80807g00001 Trme-Chr80807 3 335 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme80807g00001 3 110 B3 DNA Binding Superfamily AT4G30080 56.757 1.53e-33 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme80807g00001 - - psat:127130059 182.57