Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme8070g00001 GGAAGGTCAGTGCAAGGTGCCAATGTCTTTGGAAATGCTATTGGTACAGCAATTGGCATGGCACCAGATGCACACTTGGCAATGTACAAAGTATGCAGCATCTATGGTTGTAGTGAAAGTGCAATATTAGCTGGAATGGATGCTGCAGTTGATGATGGTGTTGATGTACTTTCGCTCTCCCTTGGAGGACCCTCCGCTCCTTTATTTGAAGATGGACTTGCACTCGGCGCATTTAGTGCGATACAAAAGGGAATTTTNNNNNNNNNNANNNNNNNNNNANNAGGTCCTGCTTATGGTACATTATCTAATGAAGCACCCTGGATTCTAACTGTTGGTGCTAGCACAACTGACAGAAAAATAGAGGCAATAGCTAAGCTTGGAAACGGGAAGGAATATCTCGGAGAATCAGTTTTCCAACCAAAAGACTTTGCATCAACATTATTGCCACTTGTGTATGCAGGTTCACTTAATACAAGTGATGATTTCATTGCCTTTTGTGACCCTTTTTCCATGAAGAACGTCGATGTTAAGGGAAAGGTAGTTTTATGTGAGCAAGGCGGATTAGTTCGAAGAGTAGCTAAAGGTCAAGCGGTTAAAGATGCTGGCGGCGCTGCTATGATACTTGTTAATAGTGAACTTGAAGCTTTCAATCCAATTTCTGATGTTCATGTTCTACCTGCAGTTCATGTAAGTTACTTTGCTGGTTTATCCATCAAAGATTATATAAACTCAACTTCAGCGCCGATAGCCACAATTATATTCAAAGGAACTGTTATTGGAAATCCACTTGCCCCTCAAGTTGCTTCATTTTCATCAAGAGGTCCAAGCAAATCAAGCCCTGGAATTCTGAAACCTGACATAATTGGACCTGGATTGAACATTCTAGCAGCATGGCCTATTTCATTAGACAATAGTACTACACCGCCGTTTAACATAATTTCAGGTACCTCAATGTCTTGTCCTCATCTCAGTGGCATTGCCGCGCTGTTGAAAAACTCTCATCCAGATTGGTCACCAGCTGCCATAAAATCAGCAATCATGACAACTGCTAATACTCTCAACCTTCATGAAAAGCCTATTTTGGACCAAAGGCTTAAACCAGCTGATTTATTTGCCGTTGGTGCCGGACATGTTAACCCTTTAAAAGCGAACGATCCAGGACTTGTTTATGATATTGAAGCAAATGATTATGTTCCTTATTTGTGTGGTTTGAATTATACTGATAAACAAGTTGGAGTTATTTTGCAACAGAAAGTGAAATGCTCCGAGGTAAAGAGCATACCACAGGCACAACTTAATTATCCATCATTTTCTATTATTTTAGGGTCTTCGTCACAGTTTTATACTAGAACATTGACAAATGTTGGACCTGTTAACACAACTTACAATGTGGTAATTGATGCGCCTTTGGCGGTCGGTATAAGTGTAGGACCATCTGAAATAACATTCACTGAGGTGAAGCAAAAGGTTACATACTTTGTTGATTTTGTACCCGAAGACAAAAAGATTAGAGGTGATAACATGATTGCTCAGGGGTCTATCAAATGGGTTTCTGGAAAGTATTCTGTTAGTATTCCTATATCTGTCATCTTTGTGTGA 1599 0.3965 GRSVQGANVFGNAIGTAIGMAPDAHLAMYKVCSIYGCSESAILAGMDAAVDDGVDVLSLSLGGPSAPLFEDGLALGAFSAIQKGIXXXXXXXXXGPAYGTLSNEAPWILTVGASTTDRKIEAIAKLGNGKEYLGESVFQPKDFASTLLPLVYAGSLNTSDDFIAFCDPFSMKNVDVKGKVVLCEQGGLVRRVAKGQAVKDAGGAAMILVNSELEAFNPISDVHVLPAVHVSYFAGLSIKDYINSTSAPIATIIFKGTVIGNPLAPQVASFSSRGPSKSSPGILKPDIIGPGLNILAAWPISLDNSTTPPFNIISGTSMSCPHLSGIAALLKNSHPDWSPAAIKSAIMTTANTLNLHEKPILDQRLKPADLFAVGAGHVNPLKANDPGLVYDIEANDYVPYLCGLNYTDKQVGVILQQKVKCSEVKSIPQAQLNYPSFSIILGSSSQFYTRTLTNVGPVNTTYNVVIDAPLAVGISVGPSEITFTEVKQKVTYFVDFVPEDKKIRGDNMIAQGSIKWVSGKYSVSIPISVIFV 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme8070g00001 532 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 529 IPR045051 -
Trme8070g00001 532 Gene3D - 401 531 - -
Trme8070g00001 532 FunFam subtilisin-like protease SBT1.5 117 259 - -
Trme8070g00001 532 SUPERFAMILY Subtilisin-like 14 388 IPR036852 GO:0004252|GO:0006508
Trme8070g00001 532 SUPERFAMILY PA domain 148 272 IPR046450 -
Trme8070g00001 532 Gene3D - 117 260 - -
Trme8070g00001 532 Pfam PA domain 149 237 IPR003137 -
Trme8070g00001 532 CDD PA_subtilisin_like 125 252 - -
Trme8070g00001 532 ProSiteProfiles Serine proteases, subtilase domain profile. 1 384 - -
Trme8070g00001 532 Pfam Fibronectin type-III domain 431 529 IPR041469 -
Trme8070g00001 532 Gene3D Peptidase S8/S53 domain 1 397 IPR036852 GO:0004252|GO:0006508
Trme8070g00001 532 Pfam Subtilase family 17 357 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme8070g00001 Trme-Chr8070 2 1600 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme8070g00001 1 529 Subtilisin-like Serine Gene Family AT1G04110 45.505 8.19e-151 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme8070g00001 - - gmx:100799902 763.066