Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme8059g00001 ATGACAGTCAGGCAGTTGGAGGCTTTAATCAGGCTGTCAGAGGCCATTGCACGGTGTCATTTGGATAATCAGGTACAAACCCGTCATGTTCGTTTAGCAGTAAAACTGCTGCAAACATCTATAATAAGAGTGGAGTCCAGTGAGATTGATCTATCCGAGTTTCAAGATCAAGATATGGACGAAGAAGCAGGTAGTGGTGAAGGAAATGATAATAATGATGCTGATGATGGTCAAGTGGGAAGCTCTACCGCTCAGCAAGCCGCTGGAACTAATGAAAAACCAGCGGATGGATCTATCCCCCAAAGAAAGAAATCTACTGTAACTGATGAATACTTTCAGAGGATTACCAAGGCCCTTGTCATGCGTCTTAGACAGCACGAGGAGACTGTAATGCAACAAGAGCACGGTGAGACTGTAATGCAAAAAGGAGATGGCTTGGCTGGGATGAGGCAACGAGATTTGATTAAATGGTATGTTGACCAACAAAATGAGAAAAATAATTACAGTTCTGTGGAGGAGGCGAAAGTTGAAATTTCCCAAATTAAAGCAATTATAGAGATTTTAATTCGAAGAGAGGGACATCTGATAGTGGTAGATGATGGCAGACAAACAGCAACAGAAGCTGCTGGTGCAGAACAATCCGAGTCTGCAGCTAGAAATGATAGAATTTTGGCTGTGGCTCCTAATTATGTTGTTGAATGA 702 0.4245 MTVRQLEALIRLSEAIARCHLDNQVQTRHVRLAVKLLQTSIIRVESSEIDLSEFQDQDMDEEAGSGEGNDNNDADDGQVGSSTAQQAAGTNEKPADGSIPQRKKSTVTDEYFQRITKALVMRLRQHEETVMQQEHGETVMQKGDGLAGMRQRDLIKWYVDQQNEKNNYSSVEEAKVEISQIKAIIEILIRREGHLIVVDDGRQTATEAAGAEQSESAARNDRILAVAPNYVVE 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme8059g00001 233 MobiDBLite consensus disorder prediction 71 92 - -
Trme8059g00001 233 MobiDBLite consensus disorder prediction 52 107 - -
Trme8059g00001 233 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 1 167 IPR031327 GO:0003677|GO:0005524|GO:0032508
Trme8059g00001 233 Gene3D - 100 233 - -
Trme8059g00001 233 Pfam MCM6 C-terminal winged-helix domain 103 232 IPR041024 -
Trme8059g00001 233 MobiDBLite consensus disorder prediction 52 69 - -
Trme8059g00001 233 Pfam MCM AAA-lid domain 1 41 IPR041562 -
Trme8059g00001 233 Coils Coil 171 191 - -
Trme8059g00001 233 Gene3D - 1 59 IPR027417 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme8059g00001 1 233 Core DNA Replication Machinery Family AT5G44635 45.817 3.80e-56 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme8059g00001 K02542 - gmx:100787290 281.182