Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme80558g00001 ATGAATGTAGTTTTTGATTGCTGTTTCACAACGGAAGCTTGGAATGAAGAGAAGTATAAAGTTTATATGGATGGTATAGTAGCTTCTCTTAGAGAGAATGTGCCTGATGCTTCTCTTATGGTTTTCAATTTTCGCGAGGAAGAGACTAAAAGTTTAATGGCAAACGTAATGTCTGAGTATGACATTACTATAATGGACTATCCTAGGCACTATGAAGGTTGTCCCGTGCTTAAAATGGAGCTCATTCACCACTTTTTAAGGTCTAGTGAAAGCTGGCTCTCACTCGGTCAACACAATGTGTTGTTGATGCATTGTGAACGTGTCCCCACACGAGCTTTTGCATTTGTTGACTCCGTTGAATCCACTCCCTTCACAATCGAGGTATCTGCAGTATATTTCCAGGAGGAATGTGGCCGTAGATTGGCCTCCGCTTGA 435 0.4161 MNVVFDCCFTTEAWNEEKYKVYMDGIVASLRENVPDASLMVFNFREEETKSLMANVMSEYDITIMDYPRHYEGCPVLKMELIHHFLRSSESWLSLGQHNVLLMHCERVPTRAFAFVDSVESTPFTIEVSAVYFQEECGRRLASA 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme80558g00001 144 Gene3D Protein tyrosine phosphatase superfamily 3 118 IPR029021 -
Trme80558g00001 144 PANTHER FORMIN-J 4 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme80558g00001 Trme-Chr80558 194 726 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme80558g00001 4 116 Protein tyrosine phosphatase (PTP) family AT5G58160 63.717 5.85e-49 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme80558g00001 - - cam:101513310 213.386