Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme8047g00001 ATGAACAACTTGCCTCAAAGAAATTACACAGATTCCAAAATCGAAGCTGAGGGAGGTGAACCACTTCGAATTGAACTGCGCGATGCTGAAAATCAGCACATAGTGAGGGGTGAGGGTTCATCAATGAAGATCCAAATCTGTGTCTTACATGGTGACTTTGAAAAAGAAGAAGATTGGACTGCTGAGGAATTTGATAAGCAAATTGTAATTCCAAGAGAGGGAAAAGGACCACTGCTGAAAGGAGATAAAATCATTACACTAAAAGATGGAGTTGCTTACATCAACAACGTGGAGTTTACTGATATAATCAAGGGAAGAACCAAACAAGTTCGGTTAGGGGCTAAAATAGTCCGACCTAATTCAATTGGATTGGATATTAGGGAAGGTAGAAGCGAACCTTTTAGGGTCTTGCATCGTCGAGTAAAGGCTTACAAGAAACACGATCGTCCATCAATGAACGATGAGGTATCACGTCTGAGAGGAATAGGTGGTAAACTTTGTGACAAGTTGGCCTCGCGTGGAATAGTAAGTGTTAAGGATTTTTTGCAGTTGTACAAAACCAATGAAGCTTCATTAAGAGAGAAAATAGGCAAGATTGCAGAGAAGTCATGGAACAAAATTATTGCACATGTCAAAGAGTGTGATGTAGATGATGATGATGAGGAGGAGGAAAGAGTTAAACAACATGCTTACAAAAATTTGAATGGTCTGAAACAAATAGCAATTGATACAACAACACATGGTTTGGTGGAGACATCATCAACATCAACATCAACAGGTGTACAAACTGCACAATATGGTGGCCAAGATCAAACTCTGCAAG 823 0.3961 MNNLPQRNYTDSKIEAEGGEPLRIELRDAENQHIVRGEGSSMKIQICVLHGDFEKEEDWTAEEFDKQIVIPREGKGPLLKGDKIITLKDGVAYINNVEFTDIIKGRTKQVRLGAKIVRPNSIGLDIREGRSEPFRVLHRRVKAYKKHDRPSMNDEVSRLRGIGGKLCDKLASRGIVSVKDFLQLYKTNEASLREKIGKIAEKSWNKIIAHVKECDVDDDDEEEERVKQHAYKNLNGLKQIAIDTTTHGLVETSSTSTSTGVQTAQYGGQDQTLQ 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme8047g00001 274 MobiDBLite consensus disorder prediction 251 274 - -
Trme8047g00001 274 Pfam Calmodulin binding protein-like N-terminal domain 2 136 IPR046831 -
Trme8047g00001 274 PANTHER OS02G0177800 PROTEIN 2 239 IPR012416 GO:0005516
Trme8047g00001 274 Pfam Calmodulin binding protein central domain 152 214 IPR046830 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme8047g00001 Trme-Chr8047 771 1776 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme8047g00001 1 220 Calmodulin-binding Proteins AT5G26920 40.708 1.08e-43 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme8047g00001 - - tpra:123890981 435.261