Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme80385g00001 ATGGCATTCTCGTCTTTCACTAACTTCAATAATTCAAAACCAAACTTCTATAAAACCCAACCTTCCGTACATTCATCATCCTCAAAAAACCAAAACAGAGCAAAAACAACAGCNNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNCCGGTGACCGGAGCAAACTTACCTCTCTTATCAGGATCAAAGGTATCTTCCGAACCGGCGGCAACAGTTTCCGGTGCGGTGTTTAATGTCGCGACGAGTATAATTGGCGCCGGAATTATGTCACTTCCGGCGACTTTGAAGGTTCTCGGAGTGATTCCGGCGTTTGTTTTGATTTTGGTGATTGCTTTATTGGCGGAAATATCGGTGGAGTTTTTGATGAGGTTTACGCATTCAGGTGAAACGACGACGTATGCTGGTGTTATGAGAGAAGCTTTTGGACCTTTAGGAGCTTTTGCAACTCAACTTTGTGTTGTGATTACTAATCTTGGGTGTTTAATTATGTACTTAATTATTATTGGTAAGTAA 525 0.379 MAFSSFTNFNNSKPNFYKTQPSVHSSSSKNQNRAKTTAXXXXXXXXXXXXXXXPVTGANLPLLSGSKVSSEPAATVSGAVFNVATSIIGAGIMSLPATLKVLGVIPAFVLILVIALLAEISVEFLMRFTHSGETTTYAGVMREAFGPLGAFATQLCVVITNLGCLIMYLIIIGK 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme80385g00001 174 MobiDBLite consensus disorder prediction 17 37 - -
Trme80385g00001 174 Pfam Transmembrane amino acid transporter protein 75 174 IPR013057 -
Trme80385g00001 174 PANTHER AMINO ACID TRANSPORTER 66 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme80385g00001 Trme-Chr80385 232 756 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme80385g00001 69 174 Amino Acid or Auxin Permease AAAP Family AT3G56200 55.660 1.25e-33 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme80385g00001 - - tpra:123881388 256.914