Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme803631g00001 TCTGGATCCAATCAAGAATACTTTGCTGCCTTGATTGAATATGAGAATGGAGATGGTGATCTTGACAGAGTTGAACTCAAGGAAGCACTTGACTCTTCCACTTGGGATTCCATGCAACAATCATGGGGTGCTGTTTGGAAATTTGAAAAAGGAGCACCATTGAAAGCACCATTTTCAATTAAGCTAACAACACTTGCATCTG 202 0.4059 SGSNQEYFAALIEYENGDGDLDRVELKEALDSSTWDSMQQSWGAVWKFEKGAPLKAPFSIKLTTLAS 67
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme803631g00001 67 Gene3D - 1 67 IPR036749 -
Trme803631g00001 67 PANTHER EXPANSIN-B3 1 64 - -
Trme803631g00001 67 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 6 67 IPR007117 -
Trme803631g00001 67 Pfam Expansin C-terminal domain 2 64 IPR007117 -
Trme803631g00001 67 SUPERFAMILY PHL pollen allergen 2 64 IPR036749 -
Trme803631g00001 67 PRINTS Major pollen allergen Lol pI signature 13 28 IPR005795 GO:0005576|GO:0019953
Trme803631g00001 67 PRINTS Major pollen allergen Lol pI signature 44 61 IPR005795 GO:0005576|GO:0019953
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme803631g00001 2 67 Expansin Gene Family AT1G65680 57.576 1.63e-23 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme803631g00001 - - gmx:548090 122.864