Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme80295g00001 GAGAAAGCTCGTAAGAAGAAAGAAGAAGAAGAGAAGAGAATGGAGAGAGAAAGAGAAAAGGAGAGAATTCGAGTCGGCAAGGAGTTGCTTGAAGCAAAGAGGATTGAAGAAGACAATGAGAGAAAACGGTTGTTAGCTTTGAGAAAAGCAGAGAAAGAGGAAGAGAGAAGGGCTAGAGAGAAAATCAAGCAAAAGTTGGAAGAAGACAAG 210 0.4095 EKARKKKEEEEKRMEREREKERIRVGKELLEAKRIEEDNERKRLLALRKAEKEEERRAREKIKQKLEEDK 70
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme80295g00001 70 Coils Coil 35 70 - -
Trme80295g00001 70 Coils Coil 2 24 - -
Trme80295g00001 70 MobiDBLite consensus disorder prediction 1 20 - -
Trme80295g00001 70 PANTHER F13M7.16 PROTEIN 1 70 - -
Trme80295g00001 70 MobiDBLite consensus disorder prediction 50 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme80295g00001 Trme-Chr80295 309 747 Singletons
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme80295g00001 10 70 C2H2 Transcription Factor Family AT1G04850 88.525 8.92e-07 42.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme80295g00001 K24348 - csin:114314609 69.707