Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme80180g00001 ATGGCTGATTTATCTGCTTTGAAAACAAGAGCAATGTTTGAAGAGCAGAAAAGAATCATACGAGAGCTACGAGATCAGTTGGCAGATAAAGAATTTCAAGTAGTTGAAGGAGAAAAGCTAAGGAAAAAACTGCACAACACTGTCTTGGAGCTGAAAGGAAATATTCGCGTGTTTTGTCGTGTGCGACCTTTACTACGAGAGGATCGTTCCGAAACGGACATGGCTGTTTCTTACCCAACATCAATGGAAATGCTTGGCCGGGGCATTGAGTTGGTGCAAAATGGACAGAAACACGTTTTTACATTTGACAAGGTGTTTAATCATGGCGCCTCTCAGCAGGAAGTTTTCACTGAAATATCACAACTGGTGCAAAGTGCGCTTGATGGCTACAAG 393 0.4249 MADLSALKTRAMFEEQKRIIRELRDQLADKEFQVVEGEKLRKKLHNTVLELKGNIRVFCRVRPLLREDRSETDMAVSYPTSMEMLGRGIELVQNGQKHVFTFDKVFNHGASQQEVFTEISQLVQSALDGYK 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme80180g00001 131 Pfam Microtubule binding 36 130 IPR031852 GO:0008017
Trme80180g00001 131 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 13 130 IPR027417 -
Trme80180g00001 131 ProSiteProfiles Kinesin motor domain profile. 54 131 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trme80180g00001 131 Coils Coil 13 33 - -
Trme80180g00001 131 Gene3D Kinesin motor domain 2 131 IPR036961 -
Trme80180g00001 131 PANTHER KINESIN-LIKE PROTEIN KLP-3 10 130 IPR027640 GO:0003777|GO:0007018
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme80180g00001 Trme-Chr80180 60 657 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme80180g00001 26 130 Calmodulin-binding Proteins AT5G65930 34.211 4.48e-15 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme80180g00001 K10405 - gmx:100818473 212.231