Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme80160g00001 GGTTCAGATCCGTCACTTTATTCCGGAAAGATCATCGAGTGTACTTGGGATTTTGATAACCTGGAATGGATATTCTTGCGAATTAGGACAGATAAATCAACTCCAAACGAGTTTAATACTTACAGAAAGGTGATGCGAAGCATAAAAGACAACATCACAGAGGAAGACTTGTTGAATGAAATAAATGAGATAATTCGCCTTCCCATGTATGCAGACAGGATAAAAACTGATAGTAAAGCAACTCAGCATGCTAATGCTGCAAAGCGAAGGTGA 273 0.3883 GSDPSLYSGKIIECTWDFDNLEWIFLRIRTDKSTPNEFNTYRKVMRSIKDNITEEDLLNEINEIIRLPMYADRIKTDSKATQHANAAKRR 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme80160g00001 90 Gene3D - 2 68 IPR012340 -
Trme80160g00001 90 FunFam mRNA-capping enzyme isoform A 1 67 - -
Trme80160g00001 90 SUPERFAMILY Nucleic acid-binding proteins 6 75 IPR012340 -
Trme80160g00001 90 Pfam mRNA capping enzyme, C-terminal domain 7 58 IPR013846 -
Trme80160g00001 90 PANTHER MRNA-CAPPING ENZYME 3 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme80160g00001 Trme-Chr80160 338 690 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme80160g00001 2 82 Protein tyrosine phosphatase (PTP) family AT3G09100 71.605 3.18e-35 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme80160g00001 K13917 - gmx:100776633 163.696