Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme801296g00001 GCATTTGTGGTTAAGAAGGCTGGAAGTGTACTTTCTCCAAAGGACGTTATCGATTACGTTGCGAAACAGGTTGCTCCACACAAGAAGGTTCAGAAAGTTGTCTTCACCGACAAGATACCGAGATCTGCGACTGGAAAGATCCTCAGAAGGCAACT 155 0.4581 AFVVKKAGSVLSPKDVIDYVAKQVAPHKKVQKVVFTDKIPRSATGKILRRQL 52
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme801296g00001 52 Pfam AMP-binding enzyme C-terminal domain 1 46 IPR025110 -
Trme801296g00001 52 Gene3D - 1 52 IPR045851 -
Trme801296g00001 52 SUPERFAMILY Acetyl-CoA synthetase-like 1 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme801296g00001 Trme-Chr801296 2 240 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme801296g00001 1 52 Monolignol Biosynthesis Gene Families AT4G19010 59.615 1.82e-15 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme801296g00001 K01904 - gmx:100804808 85.8853