Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme80126g00001 ATGACAATTGGAAGTCTTGCACCTAAGACAGAGAAGAAGAAATCATCAAGAAAGAACAAGAACAAGGCTATTGTTAGTGAAAATGCACCTTTGTTGCCTAAAAGTCAAGCCCATGAAAGTGATTCTGGGTTTGATGATTTCAATGGAGCTTCATTTTCTGGTGCTGTTTTCAACTTGGCAACTACAATTATTGGTGCTGGAATCATGGCTTTGCCTGCAACCTTGAAACAGTTGGGGTTGATTCCTGGTCTTGCTGCTATACTCATCATGGCTTTTTTGACTGAGAAGTCAATTGAGCTTTTGATTAGGTTTACAAGGGCAGGGAAATCTGTTTCATATGCTGGTTTGATGGGTGATTCCTTTGGGAAATATGGAAAAGCTTTGGCACAAATTTGTGTTATTGTTAATAACAT 413 0.3874 MTIGSLAPKTEKKKSSRKNKNKAIVSENAPLLPKSQAHESDSGFDDFNGASFSGAVFNLATTIIGAGIMALPATLKQLGLIPGLAAILIMAFLTEKSIELLIRFTRAGKSVSYAGLMGDSFGKYGKALAQICVIVNN 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme80126g00001 137 MobiDBLite consensus disorder prediction 1 42 - -
Trme80126g00001 137 Pfam Transmembrane amino acid transporter protein 50 136 IPR013057 -
Trme80126g00001 137 PANTHER AMINO ACID TRANSPORTER 40 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme80126g00001 Trme-Chr80126 1 413 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme80126g00001 2 137 Amino Acid or Auxin Permease AAAP Family AT3G30390 55.882 2.41e-42 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme80126g00001 K14207 - vum:124822180 215.698